AT1G49180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.848 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding, nucleic acid binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1); Has 129968 Blast hits to 127865 proteins in 4383 species: Archae - 162; Bacteria - 14751; Metazoa - 47537; Fungi - 13056; Plants - 32291; Viruses - 546; Other Eukaryotes - 21625 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18184840..18187444 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46842.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.26 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 408 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMMLDDYIAK SKLSESLTST VWLAKHKLTG EEAVMKCFDL SKLNRNLRDC LNNELEFLSS VDHPNIIRLL HVSQDDDFLV MVLEYCDGGT LSSYIQRYGR 101: VEEDIAKRFM KQIGAGLEII HDNHIIHRDL KPENILIDGS GDDLVLKIAD FSLARKLHPG KYLETVCGSP FYMAPEVLQF QRYNEKADMW SVGAILFELL 201: HGYPPFRGNN NVQVLRNIKS STALPFSRLI LQQMHPDCID VCSRLLSINP AATLGIEDFP FLGRIKNSRV WVKDTTFSSR QHGTRERKVA TINGRLQFDL 301: SQDAYLPQRL LENLMYIYNT IEMARVTGVP TSYLISRGES IKVLSQLLRK AKQKTWFFQM LRSWNLNKEL MKVQLYVGGF ISPTYSFTYS SITSNILINI 401: SNDIYSHC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)