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AT1G47890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.591
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor like protein 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 7 (RLP7); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 6 (TAIR:AT1G45616.1); Has 144165 Blast hits to 35486 proteins in 1317 species: Archae - 51; Bacteria - 13451; Metazoa - 35189; Fungi - 1938; Plants - 82186; Viruses - 41; Other Eukaryotes - 11309 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:AC079679EMBL:CP002684
EnsemblPlants:AT1G47890EnsemblPlants:AT1G47890.1entrez:841206Gene3D:3.80.10.10
GeneID:841206GO:GO:0016021Gramene:AT1G47890.1hmmpanther:PTHR27004
hmmpanther:PTHR27004:SF37HOGENOM:HOG000116562InterPro:IPR001611InterPro:IPR003591
InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT1G47890Pfam:PF00560
Pfam:PF08263Pfam:PF13855Pfscan:PS51450PhylomeDB:Q9C699
PIR:C96519PROSITE:PS51450Proteomes:UP000006548RefSeq:NP_175225.1
SMART:SM00369STRING:3702.AT1G47890.1SUPFAM:SSF52047SUPFAM:SSF52058
TAIR:AT1G47890tair10-symbols:AtRLP7tair10-symbols:RLP7TMHMM:TMhelix
UniGene:At.52064UniProt:Q9C699
Coordinates (TAIR10) chr1:+:17643976..17647035
Molecular Weight (calculated) 113349.00 Da
IEP (calculated) 6.88
GRAVY (calculated) -0.06
Length 1019 amino acids
Sequence (TAIR10)
(BLAST)
0001: MELYVFFIYV VGKTLHKKIQ NTNLLLLFGK LCFFTNIKVF IFSEKMSFLI RSICFLILIP SFLITFVSAT QHLCHSDQKD ALLDFKNEFG MVDSKSWVNK
0101: SDCCSWDGIT CDAKSGNVIG LDLSSIFLYG QLKSNSSLFK LRHLRDLNLA NNNFNNSPIP AEFDKLTGLE RLDLSQSSLS GQIPINLLQL TKLVSLDLSS
0201: SDFFGDESFH YLSIDKSFLP LLARNLRNLR ELDMSYVKIS SEIPEEFSNI RSLRSLNLNG CNLFGEFPSS ILLIPNLQSI DLGNNPNLRG NLPVFHENNS
0301: LLKLTILYTS FSGAIPDSIS SLKNLTSLTL SVSYFSGKIP FSLGNLSHLS HLSLSSNNLI GEIPSSIGNL NQLTNFYVGG NKLSGNLPAT LSNLTKLNTI
0401: SLSSNQFTGS LPPSISQLSK LKFFFADDNP FIGAILSPLL KIPSLTRIHL SYNQLNDLVG IENIFMLPNL ETFYIYHYNY TKVRPLDLNV FSSLKQLGTL
0501: YISRIPISTT NITSDFPSNL EYLSLRSCNI TDFPEFIRKG RNLQILDLSN NKIKGQVPDW LWRMPTLNSV DLSNNSLSGF HVSVKASPES QLTSVDLSSN
0601: AFQGPLFLPS KSLRYFSGSN NNFTGKIPRS ICGLSSLEIL DLSNNNLNGS LPWCLETLMS SLSDLDLRNN SLSGSLPEIF MNATKLRSLD VSHNRMEGKL
0701: PGSLTGCSSL EVLNVGSNRI NDMFPFELNS LQKLQVLVLH SNKFHGTLHN VDGVWFGFPQ LQIIDVSHND FFGILPSDYF MNWTAMSSKK DNNIEPEYIQ
0801: NPSVYGSSLG YYTSLVLMSK GVSMEMERVL TIYTAIDLSG NQLHGKIPDS IGLLKELRIL NMSSNGFTGH IPSSLANLKN LESLDISQNN ISGEIPPELG
0901: TLSSLAWINV SHNQLVGSIP QGTQFQRQKC SSYEGNPGLN GPSLENVCGH IKESTPTQTE PLETKEEEEE ESFSWIAAGL GFAPGVVFGL AMGYIVVSYK
1001: HQWFMKTFGR SKQQNTRTR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)