AT1G45110.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Tetrapyrrole (Corrin/Porphyrin) Methylases | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:17052572..17054546 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 38054.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 343 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MARVCLPCSF LRTSTLSILF RSPILSTTAA ISFCSSSEFA DSVAKDDSKR GPLKPGLYLV GTPIGNLEDI TLRAIRVLRS ADVILSEDTR HSGKLLQYYN 101: IKAQLLSYHK FNEAQREQAV LTRLKQGEIV ALISDAGTPG ISDPGTQLAK MCAKENIDVI PIPGACAVVA ALSASGLETD EFTFVGFLPK HSGTRKERLI 201: VSSNETRTQI FYVPPHKLSQ FLEETTPYFG ESRQCVIARE ITKLHEEFWR GSIAEAKQEF LIRQPKGEIT LLIEGKEETK AENPTESQLE EELRGLISDG 301: HSLSTAVKTV AERTSMRKKE VYSLALKKFG KQIRVEEEDE ADE |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)