AT1G38131.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.445 plasma membrane 0.271 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G38065.1); Has 834 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 834; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:14293392..14296020 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66496.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.06 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSKIHHQPN GSNNGVVSSN DNGCRSESPS PPLSPNRRVL RRQRRQTLLR ASSFSLRRNL RYLLLLPMIY ASGLLMCVGP FSGLVGWVYV PGSVYRSPEI 101: YRKLKDDIFS DNSTALELSS VWKFKRRPKM PKPCPNSTVS SHFGLNRESS ALAPSSGYLI VEANGGLNQQ RSAICNAVAV AGLLNAVLVI PRFEFHAIWK 201: DSSNFGDIYD EDHFISSLEG YVKIVRDVPD EIMTRFSYNV SSIPTIRVQA WATVNYYNGE VYPVLKEHGV IRITPFANRL AMSVPPYIQL LRCIANYKAL 301: KFSSPISTLA EKLVDRMVEK SSATGGKYVS VHLRFEEDMV AFSCCLYEGG RAEKSEMDVI RQKSWKGKFK RRDRVIRPDL NRVNGKCPLT PLEVGMMLRG 401: MGFDNNTSIY LASGRIYQPE KHLAPLQEMF PRLYTKESLA TPEELAPFQG YSSRMAALDY TVSLLSEVFV TTQGGNFPHF LMGHRRFLFG GHAKTVIPDK 501: PKLVLLLQDM EMRWEVFKKE MKLMLGESDR KGVMVPRVRK INRKTSIYTY PLPECECIFH LSSNFSNTGN ILSLGALHPS SNLISSARL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)