AT1G36990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:14027594..14029711 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 61779.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.94 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||
| Length | 581 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDKGEHSLAP EWLRSSGHAS GGGSSNHLLV SSSSHSDSAS LQYNSRNRNS RSKSDVDSIH SPFLDRSSST NSRRGSSNGS AKHAYSSFNF NRSQRDKDRS 101: RDKDRVSYVD PWDLDTSIPL RTILTGRDPD PLRRSHSMVT RKQGEHLSRG LTVGLNNGGS SNSYNGNGLL SGPSIGNSFQ RTGFDKDFPS LGAEEKQNGQ 201: DVVRVSSPGI SSVVQNLPVG NSALIGGEGW TSALAEVPNV IEKACTGSLT SPKANAVSAG TLTGPSGLNM AEALVQAPAR THTPPQGSVK TQRLEDLAIK 301: QSRQLIPVVP SAPKGLSLNS SDKSKTKQVV RTGETCLAPS RNALQQPAVL LGSFQSNPSG QIKPEKKLLV LKPARENGVS AVKESGSPSA NTNTRAASSQ 401: LMSNTQSTQS APVRSTNSPK ELKGASAFSM ISGQTIEKKP SAAQAQSRSA FYSALKQKQT ASTSITTDPV SSSTSASSSV EVKLNSSKDL IASDPSSSQA 501: TSGVEVTDSV QVASHTSGFE ATDTPDEEEA QFLRSLGWVE NNGEEYLTEE EIDSFLEQYK ELRPLFPERL SMIHEAREDV A |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)