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AT1G35910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.568
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-6-phosphate phosphatase (TAIR:AT1G78090.1); Has 2331 Blast hits to 2325 proteins in 843 species: Archae - 41; Bacteria - 1347; Metazoa - 218; Fungi - 145; Plants - 454; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).
Protein Annotations
EC:3.1.3.12eggNOG:COG1877eggNOG:ENOG410IMM9EMBL:AC027032
EMBL:AK176890EMBL:AY086513EMBL:CP002684EnsemblPlants:AT1G35910
EnsemblPlants:AT1G35910.1entrez:840493Gene3D:3.40.50.1000GeneID:840493
Genevisible:Q67XC9GO:GO:0004805GO:GO:0005992GO:GO:0006970
GO:GO:0006979GO:GO:0009507GO:GO:0009651GO:GO:0015927
GO:GO:0016311Gramene:AT1G35910.1gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWY
HOGENOM:HOG000239289InParanoid:Q67XC9InterPro:IPR003337InterPro:IPR006379
InterPro:IPR023214KEGG:ath:AT1G35910KO:K01087OMA:EDEYSSW
PaxDb:Q67XC9Pfam:PF02358Pfam:Q67XC9PhylomeDB:Q67XC9
PIR:A86481PRIDE:Q67XC9PRO:PR:Q67XC9ProteinModelPortal:Q67XC9
Proteomes:UP000006548RefSeq:NP_564464.1STRING:3702.AT1G35910.1SUPFAM:SSF56784
TAIR:AT1G35910tair10-symbols:TPPDTIGRfam:TIGR00685TIGRfam:TIGR01484
TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484UniGene:At.39452UniPathway:UPA00299
UniProt:Q67XC9
Coordinates (TAIR10) chr1:-:13363200..13364965
Molecular Weight (calculated) 41599.90 Da
IEP (calculated) 9.35
GRAVY (calculated) -0.50
Length 369 amino acids
Sequence (TAIR10)
(BLAST)
001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)