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AT1G35660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 309 Blast hits to 256 proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa - 192; Fungi - 12; Plants - 36; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IF2AeggNOG:ENOG410XSWWEMBL:CP002684EnsemblPlants:AT1G35660
EnsemblPlants:AT1G35660.1entrez:840468GeneID:840468GO:GO:0005886
Gramene:AT1G35660.1hmmpanther:PTHR15000hmmpanther:PTHR15000:SF1InParanoid:F4HZZ6
KEGG:ath:AT1G35660ncoils:CoilOMA:VNCSCQSPaxDb:F4HZZ6
PRIDE:F4HZZ6ProteinModelPortal:F4HZZ6Proteomes:UP000006548RefSeq:NP_174804.4
TAIR:AT1G35660UniGene:At.39510UniProt:F4HZZ6
Coordinates (TAIR10) chr1:+:13192743..13197655
Molecular Weight (calculated) 156425.00 Da
IEP (calculated) 6.47
GRAVY (calculated) -0.44
Length 1405 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEQSAAPQPP TMPLPYLPSS VEASRDDLQC IGTMVIVPPK PVGFLCGSIP VLADNSFPAS FTSALLPSQE TVVTAPRYQM LPMETDLNLP PLLTDFPDNV
0101: LPLAAVKSRI TGDISKEANV ITSNLSKKCE ALAVSGLVEY GDEIDVIAPV DILKQIFKIP YSKARVSIAV QRVGQTLVLN PGPDVEEGEK LIRRHNNQPK
0201: CTKNVDESLF LNFAMHSVRM EACDIPPTHR EHTEKRSSSS ALPAGENSHD NAPDDRLDKP AGSSKQSKQD GFICEKKKSK KNKAGVEPVR KNSQISEKIK
0301: SSGDSEKHSR GGSNEFLRVL FWQFHNFRML LGSDLLLFSN EKYVAVSLHL WDVSEKVTPL TWLEAWLDNV MASVPELAIC YHENGIVQGY ELLKTDDIFI
0401: LKGISEDGTP AFHPHVVQQN GLAVLRFLQS NCKEDPGAYW LYKSAGEDEL QLFDLSIISK NHSSSVHNDS ASSPSLIHSG RSDSMFSLGN LLYRVGHRLS
0501: LSVVPNDRNK CARFLTQCLN CLDAPDHLVV RAYAHEQFAR LILNSDEESD LTFESNGVQR EVKITDLEEE ALDPVTIADH ENETVTFSED KFTEDHSVSN
0601: IVPLVSVRPK LEANVSLCKE LLHSDSPDSH DTEGSAVNSS SDTSLDLGTL CQTTTSPISS KLSAINHVSQ AIKSLRWTRQ LQSSEQVDAF HDILPDFSKC
0701: SCGDPDCIEV CDIRKWLPTS KLDRKLWNLV LLLGESYLSL GEAYKEDKQL HQALNTVELA CSIYGSMPQK FEETLFVSSM NKSLSLQSKF HERTQVEDLE
0801: AKSGPSDISV EELSSTRLFW AKVWMLVGDI YVQFHILKGQ ELSRRTKGTT NHLKMQSEVV KEVQRLKKKL TEYSQNCASC SLVNCSCKSD RASSGSSASS
0901: SNGSSARTVP HSRKHNRKLQ SKNVASKVSR DVEDERVNFK VENKSRKEEE DTSGETKGAV RLEQNESNSK ETPGAKKGGI FKYLKGSKTD DAESNLLAAL
1001: NCYEETRRAL QELPSNCSEF QSVLRKKGWV CNELGRNRLG SKELNKAEDA FADAIVAFKE VCDHTNVILI NCNLGHGRRA LAEEMVPKIE ALELHRAFEN
1101: AYQKALGTAK LEYSKSLRYY MAAKTELSVA TAEASSVSDN LKVEVYTQLA NTYLRFGMLL ANEDTTAAAR EQKNILENTH DSSSDGKSSD LRKREVLSAS
1201: DAIREALALY ESLGEIRKQE AAFAYLQLAR YHKDCCLGFL ETERQGSPRK PESNVIQRAK QYALLADRNW QKSMDFYGPE NLPSMFLTIL IERSALSSTV
1301: SNFWQLNFML ESALSRLLEG RHISKTYAES LRTEDPKLYT KFMAQLQMVL KRMLALSLPS EGANKSQTCG RSGDSGKLRE LYKTSLKSTN LCDLNAMHAL
1401: WTSSP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)