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AT1G35516.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myb-like transcription factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Myb transcription factor (InterPro:IPR015495); Has 12 Blast hits to 12 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK175250EMBL:AK175331EMBL:AK175853EMBL:AK176055
EMBL:AK176102EMBL:AK176103EMBL:AK176223EMBL:AK228111
EMBL:CP002684EnsemblPlants:AT1G35516EnsemblPlants:AT1G35516.1entrez:5007770
GeneID:5007770Gramene:AT1G35516.1KEGG:ath:AT1G35516Proteomes:UP000006548
RefSeq:NP_001077667.1TAIR:AT1G35516UniGene:At.20237UniGene:At.72825
UniProt:Q682N6
Coordinates (TAIR10) chr1:+:13078774..13079355
Molecular Weight (calculated) 7571.35 Da
IEP (calculated) 8.69
GRAVY (calculated) 0.61
Length 68 amino acids
Sequence (TAIR10)
(BLAST)
1: MAFPAWMSGF CPAMFRATFD CRGSSDTVRF FTTMVGLRLA SIGFFSGGRL AKISGINCLW EIFPFQIC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)