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AT1G35190.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8692 Blast hits to 8659 proteins in 992 species: Archae - 0; Bacteria - 1158; Metazoa - 125; Fungi - 1109; Plants - 4572; Viruses - 0; Other Eukaryotes - 1728 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G35190-MONOMEReggNOG:COG3491eggNOG:KOG0143EMBL:AC079605
EMBL:BT030042EMBL:CP002684EnsemblPlants:AT1G35190EnsemblPlants:AT1G35190.1
entrez:840408ExpressionAtlas:Q9C6F0Gene3D:2.60.120.330GeneID:840408
GO:GO:0005506GO:GO:0051213Gramene:AT1G35190.1gramene_pathway:1.14.11.23
gramene_pathway:PWY-3101hmmpanther:PTHR10209hmmpanther:PTHR10209:SF146HOGENOM:HOG000276736
InterPro:IPR002283InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443
OMA:CITNTNTPfam:PF03171Pfam:PF14226Pfscan:PS51471
PhylomeDB:Q9C6F0PIR:G86472PRINTS:PR00682PROSITE:PS51471
Proteomes:UP000006548RefSeq:NP_174753.1SMR:Q9C6F0STRING:3702.AT1G35190.1
SUPFAM:SSF51197TAIR:AT1G35190UniGene:At.17215UniProt:Q9C6F0
Coordinates (TAIR10) chr1:+:12890544..12892632
Molecular Weight (calculated) 37637.10 Da
IEP (calculated) 5.56
GRAVY (calculated) -0.41
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MENHTTMKVS SLNCIDLAND DLNHSVVSLK QACLDCGFFY VINHGISEEF MDDVFEQSKK LFALPLEEKM KVLRNEKHRG YTPVLDELLD PKNQINGDHK
101: EGYYIGIEVP KDDPHWDKPF YGPNPWPDAD VLPGWRETME KYHQEALRVS MAIARLLALA LDLDVGYFDR TEMLGKPIAT MRLLRYQGIS DPSKGIYACG
201: AHSDFGMMTL LATDGVMGLQ ICKDKNAMPQ KWEYVPPIKG AFIVNLGDML ERWSNGFFKS TLHRVLGNGQ ERYSIPFFVE PNHDCLVECL PTCKSESELP
301: KYPPIKCSTY LTQRYEETHA NLSIYHQQT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)