AT1G34780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.867 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : APR-like 4 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
APR-like 4 (APRL4); INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 1005 Blast hits to 976 proteins in 184 species: Archae - 0; Bacteria - 10; Metazoa - 475; Fungi - 115; Plants - 289; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:12748835..12750124 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35010.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.00 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.00 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 310 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKEILLLLL VIMFLTVADV DAVRVPFCAT KSAKDSIFGL RDQTCSVSGV ESDERPRFVA VTEGDERWLQ IALDMIHKNK CDYVALLFYA SWCPFSRSFR 101: PSFDVISSLY SSIPHFAIKE SSIKPSTLSK YGVHGFPTLL LLNSTMRARY RGTRMLDSLV AFYSDVTGIE TLDKTSLERS VSVPHLGNEN NTEPENCPFT 201: WARSPENMLR QETYLALAIV FVLLRLLHLI YPTLVVFMKF TWRRIAQNMR LESLLEHTVG FLSRAVQLCM HRRSNLQGGA MNARAWASKS LATVSIGDSS 301: SSNRRSSSSQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)