AT1G34120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.978 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : inositol polyphosphate 5-phosphatase I | ||||||||||||
| Curator Summary (TAIR10) |
Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2. | ||||||||||||
| Computational Description (TAIR10) |
MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 1 (AT5PTASE1); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2567 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 891; Fungi - 674; Plants - 686; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12426831..12429526 | ||||||||||||
| Molecular Weight (calculated) | 67355.20 Da | ||||||||||||
| IEP (calculated) | 5.60 | ||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||
| Length | 586 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEVRSRSRR TESNWATICC SAFSCLQLYW ARIVLRKWFN VSASESDYSA DSDDDYEDRS QEFDPISSGV TNPRVDTDDR PKLRRRNSET FRMQYIDTKA 101: IRICAGTWNV GGRVPSSDLD IDGWLDTLEP ADIYVLGLQE IVPLNAGNIF GMEDDQPALE WENLIRDALN RVQPRKLKIK SHSDPPSPSK FKQPEEVPYS 201: VEDMFVETSH DACDGISSMD NKLNSVESTD VPIVSEDSLT NIDVLGSTND NASCLPIQEY LQRQFSTPNT PDRSLSMQIN SDSKREERFS YTERVGLSWP 301: EPPLRLLNQY VSERRGSFKS VNLTITNLRK PSYVRIVSKQ MVGVFLTIWV RRNLRKHISN LCVSTVGVGI MGYIGNKGSV SVSMSIYQTP FCFLCTHLSS 401: GEKDTDQEKR NDDVREIHRR TQFLPHSLNA NELPRSICNH ERIIWLGDLN YRINLSYEKT HELIARKEWQ RLVEYDQLSR EMTKGNLFEG WSEGTLDFAP 501: TYKYEIDSEN YIGDDPESGK RRPAWCDRII WNGKGMKLFN YRRNEIKLSD HRPVTATFLA EVEVLSPRKL QHALTLTYAE IQGLDA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)