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AT1G27620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid, pollen tube; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G40230.1); Has 2626 Blast hits to 2616 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 66; Plants - 2554; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G27620-MONOMEReggNOG:ENOG410IIJ4eggNOG:ENOG410YCT6EMBL:AC005916
EMBL:AC012375EMBL:BT015053EMBL:BT015859EMBL:CP002684
EnsemblPlants:AT1G27620EnsemblPlants:AT1G27620.1entrez:839654Gene3D:3.30.559.10
GeneID:839654GO:GO:0016747Gramene:AT1G27620.1hmmpanther:PTHR31642
hmmpanther:PTHR31642:SF5HOGENOM:HOG000237410InterPro:IPR003480InterPro:IPR023213
KEGG:ath:AT1G27620OMA:HAWAHATPfam:PF02458PhylomeDB:Q9S808
Proteomes:UP000006548RefSeq:NP_174083.1SMR:Q9S808TAIR:AT1G27620
UniGene:At.11522UniProt:Q9S808
Coordinates (TAIR10) chr1:+:9608444..9610432
Molecular Weight (calculated) 49800.90 Da
IEP (calculated) 7.11
GRAVY (calculated) -0.19
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MQELPDCLYE ENQPTLITPL SPTPNHSLYL SNLDDHHFLR FSIKYLYLFQ KSISPLTLKD SLSRVLVDYY PFAGRIRVSD EGSKLEVDCN GEGAVFAEAF
101: MDITCQDFVQ LSPKPNKSWR KLLFKVQAQS FLDIPPLVIQ VTYLRCGGMI LCTAINHCLC DGIGTSQFLH AWAHATTSQA HLPTRPFHSR HVLDPRNPPR
201: VTHSHPGFTR TTTVDKSSTF DISKYLQSQP LAPATLTFNQ SHLLRLKKTC APSLKCTTFE ALAANTWRSW AQSLDLPMTM LVKLLFSVNM RKRLTPELPQ
301: GYYGNGFVLA CAESKVQDLV NGNIYHAVKS IQEAKSRITD EYVRSTIDLL EDKTVKTDVS CSLVISQWAK LGLEELDLGG GKPMYMGPLT SDIYCLFLPV
401: ASDNDAIRVQ MSLPEEVVKR LEYCMVKFLD GKDNEDENSR AC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)