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AT1G26660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Prefoldin chaperone subunit family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053); Has 337 Blast hits to 337 proteins in 114 species: Archae - 14; Bacteria - 2; Metazoa - 207; Fungi - 41; Plants - 40; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Protein Annotations
EMBL:AY064022EMBL:AY096609EMBL:CP002684EnsemblPlants:AT1G26660
EnsemblPlants:AT1G26660.1entrez:839206ExpressionAtlas:Q8VZL7Gene3D:1.10.287.370
GeneID:839206Gramene:AT1G26660.1hmmpanther:PTHR13345hmmpanther:PTHR13345:SF4
HOGENOM:HOG000005748IntAct:Q8VZL7InterPro:IPR004127InterPro:IPR009053
ncoils:CoilPfam:PF02996PhylomeDB:Q8VZL7Proteomes:UP000006548
RefSeq:NP_564253.2SUPFAM:SSF46579TAIR:AT1G26660UniGene:At.27100
UniProt:Q8VZL7
Coordinates (TAIR10) chr1:+:9212298..9213765
Molecular Weight (calculated) 17766.20 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.75
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEGRQKDLQ LLEEIIDKGL KQKLVHATAS RDKIFEEQKT LSDLRKNLET LEKNGVNSLK TRVNLGSEVY MQAEVPDTRH IFMDVGLGFY VEFTRQEALD
101: YIAQREERTQ KQLEEYTGVI TQIKGRIKLA HYQIQQILNL PEENPSSRQR AF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)