AT1G23330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.458 plasma membrane 0.409 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10740.4); Has 777 Blast hits to 777 proteins in 229 species: Archae - 0; Bacteria - 631; Metazoa - 3; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:8279874..8281891 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53319.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.99 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||
| Length | 471 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVPWLMVSAI QVVELSVSSV VHMFYGLYIF SSAVAGDLTQ SLSESIFKPK STIEVKQIDQ EKTTDVNDLP PIVLVHGIFG FGKGRLGGLS YFAGAEKKDE 101: RVLVPDLGSL TSVHDRAREL FYYLKGGLVD YGEEHSKACG HSQFGRFYEK GEYQEWDEDH PIHFVGHSAG AQVVRVLQQM LADKMFEGYE NTNENWVLSL 201: TSLSGALNGT TRTYIDGIQP EDGKSLKPIS LLQICKLGVI MYDWIDIPWL KSYYNFGFDH FNMSRKKTGV RGLVDLLLGN AGPFAACGDW ILPDLSIQGS 301: MTLNASLQTF PNTFYFSYAT KRTTKPLGMM TVPSGVMGIH PLLFIRVLQM SQWQFPRDIP LPYKGYRDED WQDNDGALNT ISMTHPRIPV EHSSLILRSD 401: SDCLPLQPGI WYYKIVEADH IMFIINRERA GVEFDLIYDS IFERCRKHVF RKAPQTLPNE AQHQERGGQE E |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)