AT2G16760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcium-dependent phosphotriesterase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: SMP-30/Gluconolaconase/LRE-like region (InterPro:IPR013658), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G47370.1); Has 136 Blast hits to 136 proteins in 42 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 2; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:7275739..7277122 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35312.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.16 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.20 | ||||||||||||||||||||||||||||||||||||
| Length | 327 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPSFCSGRC TAALFLVISA VPIAYLISLE LAVPSTHVFS YQSSGFFREC AKWDDVGRRF LVSFMDGGGV GEIVPKDSDD VLEEVTLVKD VDLAGNASLG 101: IAIDHVRNRL LVAVADLLGN RYSALAAYDL STWRRLFLAE LSGQSKEKTF ADDVAVDEQG NAYVTDAKAS KIWKVDVNGK LVNTITSPLF TPPGWYNNLV 201: ALNGIVYHPD GFLIVIHTFS GYLYKIDLTN GDVSNQVSVI DVSGGTLRFG DGLELLSPTK IVVAGSSSTK LVESSDGWRT ASVTGWFSSG MVHRVVSSAT 301: VKEGRVYLNH IVGFGSKKKH VLVEAVF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)