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AT1G23205.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G70720.1); Has 800 Blast hits to 793 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 800; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JX5JeggNOG:ENOG41104A2EMBL:AC002311EMBL:AC005292
EMBL:AK222111EMBL:BT025267EMBL:CP002684EnsemblPlants:AT1G23205
EnsemblPlants:AT1G23205.1entrez:838929Gene3D:1.20.140.40GeneID:838929
GO:GO:0004857Gramene:AT1G23205.1hmmpanther:PTHR31080hmmpanther:PTHR31080:SF10
HOGENOM:HOG000240597InterPro:IPR006501KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11
KEGG:ath:AT1G23205ncoils:CoilOMA:NRCVDKAPfam:PF04043
PhylomeDB:O49297PIR:D86366Proteomes:UP000006548RefSeq:NP_173734.1
SMART:SM00856STRING:3702.AT1G23205.1SUPFAM:SSF101148TAIR:AT1G23205
TIGRfam:TIGR01614TIGRFAMs:TIGR01614UniGene:At.10538unipathway:UPA00545
UniProt:O49297
Coordinates (TAIR10) chr1:-:8234234..8234851
Molecular Weight (calculated) 22677.80 Da
IEP (calculated) 4.87
GRAVY (calculated) -0.11
Length 205 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLSLHQPLL FFFLASVLPL ILTVHSQSDD SDFIRTSCNT TLYPDLCFSS LSSFSSSVHN DPALLARAAI SVTLTKTLDL ASYLANITTL QPESNEDGAH
101: HPTAAAVFHD CFDNLKDAVE EMKGSMKQMR ELVSTGSLES FRFQMSNVQT WLSAALTDEE TCTDGFKDIH DEPRKDDICA RVDDVKKMTS NALALVNRCV
201: DKAIH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)