AT1G18160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.816 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11850.1); Has 123759 Blast hits to 122075 proteins in 4739 species: Archae - 100; Bacteria - 12949; Metazoa - 47184; Fungi - 11113; Plants - 33371; Viruses - 486; Other Eukaryotes - 18556 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6249126..6253835 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108166.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.25 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 992 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKMNMKKFLK KLRITPNQRD DGEGSVSNRS NKSSDAEPSP SDSLRSQDNS EFKPFLGLSN WLSSVTHRKS PSSSNATNSK EDDTTMEHGG PVGSESGMQG 101: LGSSSNSKDP EVEEEYQIQL ALELSAREDP EAAQIEAMKQ FSLGSRPSAP ENTPAELMAY RYWNYNCLGY DDKIVDGFYD LCGVMNESSL KRIPPLVDLQ 201: GTLVSDGVTW DAVLVNSSKD SNLLRLEQMA LDIAAKSKSA SSSGFVNSEL VRQLAVLVAD YMGGPVLDPD STLRAWWSLS YSLKATLRSM VLPLGSLTIG 301: LARHRALLFK VLCDSVGVPC RIVKGQQYTG SDDVAMNSIK TDDGREYIVD LMGDPGTLIP ADAAGLQMDF DDSVYSASPR DVDSSHVASS SSGVESSIEE 401: HTESWSAEHR SRTKGSREEN QSAGGGDLMI PNIREAVGSQ KAPVQHLSSK PTHSFTHARS PSWTEGVSSP AGRRMKVKDV SQYMIDAAKE NPQLAQKLHD 501: VLLESGVVAP RNLFSEVYSE SMEATGEIKS VAESNDEKGK DFGTIQQGRN QSNLGPVRFL PPLPRPQSKA ITHDLREHSG SGLGHLSEHC NIDGHSDSSH 601: SETSTDYPRN VPVAVAAAAV VASSMVVAAA KSANSDSSTL ELSAAAAAAV MATAAAVSRQ FELDSLSNGD AGSGGLHGVD SGGERISDRS IGNESSKSDA 701: AIDDVAECEI LWEEITVAER IGLGSYGEVY RGDWHGTAVA VKKFIDQDIT GEALEEFRSE VRMMRRLRHP NIVLFMGAVT RPPNLSIVTE FLPRGSLYRL 801: IHRPNNQLDE RKRLRMALDA ARGMNYLHSC NPVIVHRDLK SPNLLVDKNW VVKVCDFGLS RMKVSTYLSS KSTAGTAEWM APEVLRNEPA DEKCDVYSYG 901: VILWELFTLQ QPWGKMNPMQ VVGAVGFQHR RLDIPEFVDP GIADIIRKCW QTDPRLRPSF GEIMDSLKQL QKPIQRAAVP SSSALTTDEQ EQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)