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AT1G17330.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.563
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Metal-dependent phosphohydrolase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1418eggNOG:ENOG410IKIIEMBL:BT002376EMBL:BT009671
EMBL:CP002684EnsemblPlants:AT1G17330EnsemblPlants:AT1G17330.1entrez:838304
Gene3D:1.10.3210.10GeneID:838304GO:GO:0016787Gramene:AT1G17330.1
hmmpanther:PTHR33594hmmpanther:PTHR33594:SF1HOGENOM:HOG000034252InterPro:IPR003607
InterPro:IPR006674KEGG:ath:AT1G17330KO:K06950OMA:DSKFHNG
Pfam:PF01966PhylomeDB:Q8GUM8Proteomes:UP000006548RefSeq:NP_173176.1
SMART:SM00471SMR:Q8GUM8STRING:3702.AT1G17330.1SUPFAM:SSF109604
TAIR:AT1G17330UniGene:At.41841UniProt:Q8GUM8
Coordinates (TAIR10) chr1:+:5929966..5931595
Molecular Weight (calculated) 25504.40 Da
IEP (calculated) 5.47
GRAVY (calculated) -0.63
Length 222 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAKTMRKAE ELVEKAMKGN DASHDAWHVW RVRDLALSIA REEGLSSNSD SMEIVELAAL LHDIGDYKYI RDPSEEKLVE NFLDDEGIEE TKKTKILTII
101: NGMGFKDELA GVALCESLPE FGVVQDADRL DAIGAIGIAR CFTFGGSRNR VLHDPEIKPR TELTKEQYIK REEQTTINHF HEKLLKLKKL MKTEAGKRRA
201: EKRHKFMEEY LKEFYEEWDG ST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)