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AT1G16410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.981
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome p450 79f1
Curator
Summary (TAIR10)
member of CYP79F
Computational
Description (TAIR10)
cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 27252 Blast hits to 27093 proteins in 1494 species: Archae - 44; Bacteria - 2170; Metazoa - 10673; Fungi - 5027; Plants - 8510; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G16410-MONOMERBioCyc:ARA:GQT-190-MONOMERBioCyc:MetaCyc:AT1G16410-MONOMERBioGrid:23451
EC:1.14.13.n5eggNOG:COG2124eggNOG:KOG0156EMBL:AC006341
EMBL:AY035021EMBL:AY050890EMBL:AY114074EMBL:CP002684
EMBL:EF598753EMBL:EF598754EMBL:EF598755EMBL:EF598756
EMBL:EF598757EMBL:EF598758EMBL:EF598759EMBL:EF598760
EMBL:EF598761EMBL:EF598762EMBL:EF598763EMBL:EF598764
EMBL:EF598765EMBL:EF598766EMBL:EF598767EMBL:EF598768
EMBL:EF598769EMBL:EF598770EMBL:EF598771EMBL:EF598772
EMBL:EF598773EMBL:EF598774EMBL:EF598775EMBL:EF598776
EnsemblPlants:AT1G16410EnsemblPlants:AT1G16410.1entrez:838211Gene3D:1.10.630.10
GeneID:838211Genevisible:Q949U1GO:GO:0005506GO:GO:0005783
GO:GO:0005789GO:GO:0009625GO:GO:0009684GO:GO:0016020
GO:GO:0016021GO:GO:0016709GO:GO:0019761GO:GO:0020037
GO:GO:0098542gramene_plant_reactome:1119486gramene_plant_reactome:6875991hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF1InParanoid:Q949U1InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT1G16410KO:K12154OMA:PLVYKPE
PaxDb:Q949U1Pfam:PF00067Pfam:Q949U1PhylomeDB:Q949U1
PIR:D86299PRIDE:Q949U1PRINTS:PR00463PRO:PR:Q949U1
PROSITE:PS00086ProteinModelPortal:Q949U1Proteomes:UP000006548RefSeq:NP_563996.2
RefSeq:NP_973840.1scanprosite:PS00086SMR:Q949U1STRING:3702.AT1G16410.1
SUPFAM:SSF48264TAIR:AT1G16410tair10-symbols:BUS1tair10-symbols:CYP79F1
tair10-symbols:SPS1TMHMM:TMhelixUniGene:At.11316UniProt:Q949U1
Coordinates (TAIR10) chr1:+:5608862..5611118
Molecular Weight (calculated) 61699.00 Da
IEP (calculated) 8.39
GRAVY (calculated) -0.29
Length 538 amino acids
Sequence (TAIR10)
(BLAST)
001: MMSFTTSLPY PFHILLVFIL SMASITLLGR ILSRPTKTKD RSCQLPPGPP GWPILGNLPE LFMTRPRSKY FRLAMKELKT DIACFNFAGI RAITINSDEI
101: AREAFRERDA DLADRPQLFI METIGDNYKS MGISPYGEQF MKMKRVITTE IMSVKTLKML EAARTIEADN LIAYVHSMYQ RSETVDVREL SRVYGYAVTM
201: RMLFGRRHVT KENVFSDDGR LGNAEKHHLE VIFNTLNCLP SFSPADYVER WLRGWNVDGQ EKRVTENCNI VRSYNNPIID ERVQLWREEG GKAAVEDWLD
301: TFITLKDQNG KYLVTPDEIK AQCVEFCIAA IDNPANNMEW TLGEMLKNPE ILRKALKELD EVVGRDRLVQ ESDIPNLNYL KACCRETFRI HPSAHYVPSH
401: LARQDTTLGG YFIPKGSHIH VCRPGLGRNP KIWKDPLVYK PERHLQGDGI TKEVTLVETE MRFVSFSTGR RGCIGVKVGT IMMVMLLARF LQGFNWKLHQ
501: DFGPLSLEED DASLLMAKPL HLSVEPRLAP NLYPKFRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)