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AT5G23010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methylthioalkylmalate synthase 1
Curator
Summary (TAIR10)
Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates.
Computational
Description (TAIR10)
methylthioalkylmalate synthase 1 (MAM1); FUNCTIONS IN: 2-(2'-methylthio)ethylmalate synthase activity; INVOLVED IN: glucosinolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), Pyruvate carboxyltransferase (InterPro:IPR000891); BEST Arabidopsis thaliana protein match is: 2-isopropylmalate synthase 2 (TAIR:AT5G23020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G23010-MONOMERBRENDA:2.3.3.13EC:2.3.3.-eggNOG:COG0119
eggNOG:KOG2367EMBL:AB026660EMBL:AJ131517EMBL:AJ486882
EMBL:AJ486883EMBL:AJ486884EMBL:AJ486885EMBL:AJ486886
EMBL:AJ486887EMBL:AJ486888EMBL:AM180572EMBL:AY049037
EMBL:AY054203EMBL:AY070471EMBL:AY149926EMBL:CP002688
EnsemblPlants:AT5G23010EnsemblPlants:AT5G23010.1entrez:832365Gene3D:3.20.20.70
GeneID:832365Genevisible:Q9FG67GO:GO:0009414GO:GO:0009507
GO:GO:0009625GO:GO:0010177GO:GO:0019752GO:GO:0019761
Gramene:AT5G23010.1hmmpanther:PTHR10277hmmpanther:PTHR10277:SF9HOGENOM:HOG000046861
InParanoid:Q9FG67InterPro:IPR000891InterPro:IPR002034InterPro:IPR013785
iPTMnet:Q9FG67KEGG:00290+2.3.3.13KEGG:00620+2.3.3.13KEGG:ath:AT5G23010
KO:K15741OMA:PEDVGNRPaxDb:Q9FG67Pfam:PF00682
Pfam:Q9FG67Pfscan:PS50991PhylomeDB:Q9FG67PRIDE:Q9FG67
PRO:PR:Q9FG67PROSITE:PS00815PROSITE:PS00816PROSITE:PS50991
ProteinModelPortal:Q9FG67Proteomes:UP000006548RefSeq:NP_197692.1scanprosite:PS00815
scanprosite:PS00816SMR:Q9FG67STRING:3702.AT5G23010.1SUPFAM:SSF51569
TAIR:AT5G23010tair10-symbols:IMS3tair10-symbols:MAM1UniGene:At.7567
unipathway:UPA00048UniProt:Q9FG67
Coordinates (TAIR10) chr5:+:7703173..7706769
Molecular Weight (calculated) 55128.20 Da
IEP (calculated) 7.28
GRAVY (calculated) -0.17
Length 506 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSLLTSSV MIPTTGSTVV GRSVLPFQSS LHSLRLTHSY KNPALFISCC SSVSKNAATS STDLKPVVER WPEYIPNKLP DGNYVRVFDT TLRDGEQSPG
101: GSLTPPQKLE IARQLAKLRV DIMEVGFPGS SEEELETIKT IAKTVGNEVD EETGYVPVIC AIARCKHRDI EATWEALKYA KRPRILVFTS TSDIHMKYKL
201: KKTQEEVIEM AVSSIRFAKS LGFNDIQFGC EDGGRSDKDF LCKILGEAIK AGVTVVTIGD TVGINMPHEY GELVTYLKAN TPGIDDVVVA VHCHNDLGLA
301: TANSIAGIRA GARQVEVTIN GIGERSGNAS LEEVVMALKC RGAYVINGVY TKIDTRQIMA TSKMVQEYTG LYVQAHKPIV GANCFVHESG IHQDGILKNR
401: STYEILSPED IGIVKSQNSG LVLGKLSGRH AVKDRLKELG YELDDEKLNA VFSLFRDLTK NKKRITDADL KALVTSSDEI SLEKLNGANG LKSNGYIPVP
501: QVSSNV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)