AT4G12030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : bile acid transporter 5 | ||||||||||||
| Curator Summary (TAIR10) |
Required for the biosynthesis of methionine-derived glucosinolates. Involved in the transport of 2-keto acids between chloroplasts and the cytosol. | ||||||||||||
| Computational Description (TAIR10) |
bile acid transporter 5 (BAT5); CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT4G22840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:7211716..7212713 | ||||||||||||
| Molecular Weight (calculated) | 29212.80 Da | ||||||||||||
| IEP (calculated) | 9.13 | ||||||||||||
| GRAVY (calculated) | 0.94 | ||||||||||||
| Length | 273 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMFAVGINSN ERDFLEALKR PDAIFAGYIG QYLIKPLLGY IFGVIAVSLF NLPTSIGAGI MLVSCVSGAQ LSNYTTFLTD PSLAALSIVM TSISTATAVL 101: VTPMLSLLLI GKKLPVDVFG MISSILQVVI TPIAAGLLLN RLFPRLSNAI KPFLPALTVI DMSCCIGAPL ALNIDSILSP FGATILFLVI TFHLLAFVAG 201: YFFTGFFFSK APDVKALQRT ISYETGMQSS LLALALATKF FQDPLVGVPP AISTVVMSLM GVSLVTIWKN RKE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)