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AT1G15125.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.676
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G68040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G15125-MONOMEReggNOG:ENOG410JAHCeggNOG:ENOG4111PH9EMBL:AC007591
EMBL:CP002684EnsemblPlants:AT1G15125EnsemblPlants:AT1G15125.1entrez:838076
Gene3D:3.40.50.150GeneID:838076GO:GO:0008168Gramene:AT1G15125.1
hmmpanther:PTHR31009hmmpanther:PTHR31009:SF14HOGENOM:HOG000238197InterPro:IPR005299
InterPro:IPR029063KEGG:ath:AT1G15125OMA:THKSIMIPfam:PF03492
PhylomeDB:Q9XI57PIR:A86285Proteomes:UP000006548RefSeq:NP_683307.2
SMR:Q9XI57SUPFAM:SSF53335TAIR:AT1G15125UniGene:At.45283
UniProt:Q9XI57
Coordinates (TAIR10) chr1:+:5204625..5205912
Molecular Weight (calculated) 38854.00 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.10
Length 351 amino acids
Sequence (TAIR10)
(BLAST)
001: MNGGDGASSY ARNSSYQRGA IEAAEALLRN EINARLDITN HSFSSFTIAD FGCSSGPNTV IAVDIIIQAL YHKFTSSLPN TTTPQFQVFF NDVSHTDFNA
101: LFALLPPQRP YFVAGVPGSF YGNLFPKAHL NLAYSSCALC WLSDLPSELT DTSSPAYNRG RIHYTGASAE VAQAYSSQYK KDIKLFLHAR SQELAENGLM
201: ALIVPGVPDG FLDCQEASTG SEFDLLGSCL MDMAKEGIIE EEEVNSFNLP IYYTTPKELE DIIRSNGELK IDKMETLGSM DAQDTMPDLE SRVLYLRAVL
301: EGLVRTHFGH QILDDLFDRY ALKLAHSSFI LQPQTHKSIM IFALLSRCHD I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)