suba logo
AT1G14350.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Duplicated homeodomain-like superfamily protein
Curator
Summary (TAIR10)
Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.
Computational
Description (TAIR10)
FOUR LIPS (FLP); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 88 (TAIR:AT2G02820.2); Has 8541 Blast hits to 7630 proteins in 544 species: Archae - 0; Bacteria - 2; Metazoa - 904; Fungi - 531; Plants - 5146; Viruses - 6; Other Eukaryotes - 1952 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5147eggNOG:KOG0048EMBL:AF371982EMBL:BT026126
EMBL:CP002684EnsemblPlants:AT1G14350EnsemblPlants:AT1G14350.1EnsemblPlants:AT1G14350.2
entrez:837997Gene3D:1.10.10.60GeneID:837997GO:GO:0003677
GO:GO:0003700GO:GO:0006355GO:GO:0007049GO:GO:0009553
GO:GO:0010052Gramene:AT1G14350.1Gramene:AT1G14350.2hmmpanther:PTHR10641
hmmpanther:PTHR10641:SF461InterPro:IPR001005InterPro:IPR009057InterPro:IPR017930
InterPro:IPR028311KEGG:ath:AT1G14350KO:K09422OMA:PKINALM
PANTHER:PTHR10641:SF461Pfam:PF13921Pfscan:PS51294PhylomeDB:Q94FL6
PROSITE:PS51294Proteomes:UP000006548RefSeq:NP_001077534.1RefSeq:NP_563948.1
SMART:SM00717SMR:Q94FL6STRING:3702.AT1G14350.1SUPFAM:SSF46689
TAIR:AT1G14350tair10-symbols:AtMYB124tair10-symbols:FLPtair10-symbols:MYB124
UniGene:At.12041UniGene:At.56083UniProt:Q94FL6
Coordinates (TAIR10) chr1:+:4908427..4910647
Molecular Weight (calculated) 49602.20 Da
IEP (calculated) 6.88
GRAVY (calculated) -0.87
Length 436 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDTKKKKKK NINNNQDSKK KERHIVTWSQ EEDVILREQI TLHGTENWAI IASKFKDKST RQCRRRWYTY LNSDFKRGGW SPEEDMLLCE AQRVFGNRWT
101: EIAKVVSGRT DNAVKNRFTT LCKKRAKHEA MTKDSNSNTK RMLFLDGIST PRKSENETPI AKKLKRSHIL DLTEISNYGR AEACVNQQIR SPFSVLARNA
201: TGIDSLEEQN QTSNVNESDG EGMFLKKDDP KVTALMQQAE LLSSLAQKVN ADNTEQSMEN AWKVLQDFLN KGKENDLFRY GIPDIDFKIE EFKDLIEDLR
301: SGYEDNQLSW RQPDLHDSPA SSEYSSGSTI MVDQSGDKTQ PFSADTQTEH KQVGEELLVP KNPDENMPIS GEEKFSSPIQ VTPLFRSLAD GIPSPQFSES
401: ERSFLLKTLG IESSSPCPSA NPSKPPPCKR VLLHSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)