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AT1G14310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G41250.1); Has 5555 Blast hits to 5555 proteins in 1508 species: Archae - 313; Bacteria - 4016; Metazoa - 183; Fungi - 73; Plants - 110; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1011eggNOG:KOG3085EMBL:AC012188EMBL:CP002684
EnsemblPlants:AT1G14310EnsemblPlants:AT1G14310.1entrez:837992Gene3D:3.40.50.1000
GeneID:837992GO:GO:0016787Gramene:AT1G14310.1hmmpanther:PTHR12725
hmmpanther:PTHR12725:SF55HOGENOM:HOG000006300InterPro:IPR006439InterPro:IPR011949
InterPro:IPR023214KEGG:ath:AT1G14310OMA:RPFWKLVPfam:PF13419
PhylomeDB:Q9M9T1PIR:C86277PRINTS:PR00413Proteomes:UP000006548
RefSeq:NP_172883.2SMR:Q9M9T1STRING:3702.AT1G14310.1SUPFAM:SSF56784
TAIR:AT1G14310TIGRfam:TIGR01549TIGRfam:TIGR02252TIGRFAMs:TIGR01549
TIGRFAMs:TIGR02252UniGene:At.41977UniGene:At.69279UniProt:Q9M9T1
Coordinates (TAIR10) chr1:+:4885049..4886672
Molecular Weight (calculated) 28181.50 Da
IEP (calculated) 5.04
GRAVY (calculated) -0.26
Length 254 amino acids
Sequence (TAIR10)
(BLAST)
001: MEACLRCSRG SYLIEAMRPL SSSLRPSSSV SFSTGKPIKR AYDGLLLDAG GTLLQLSKPV HETYASLGQK YGLKTTPAEI KEGFKRVFSA PWPEKLRYQG
101: DGRPFWKLVV SEATGCSDND YFEDVYQYYA NGEAWHLPEG AYETMSLLKD AGVKMAVVSN FDTRLRKLLK DLNVIDMFDA VIVSAEVGYE KPDERIFKSA
201: LEQISVDVNR AVHVGDDEGA DKGGANAIGI ACWLWGEDVQ TFSDIQKRIL VSEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)