AT3G58010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : plastoglobulin 34kD | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
plastoglobulin 34kD (PGL34); FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT2G42130.4); Has 158 Blast hits to 158 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21475949..21477463 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34092.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.08 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
| Length | 308 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALIQHGSVS GTSAVRLSFS SSVSPPSSSP PLSRVSLNFQ SEKKSCYRRM ICRAMVQDSV QGIPSVYARE MERLSAKESL ILAFNDAGGF EALVTGKITD 101: MQKIDVNERI TNLERLNPTP RPTTSPYLEG RWSFEWFGVN TPGSLAVRVM FERFPSTLVS LSNMEIFIKD NNTKATANIK LLNSIENKIT LSSKLTIEGP 201: LRMKEEYLEG LLESPTVIEE AVPDQLRGLL GQATTTLQQL PEPIKDTLAN GLRIPLGGTY QRFFMISYLD DEILIVRDTA GVPEVLTRVE TSSPMSSSSV 301: VENLEYNS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)