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AT3G10130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30961429 (2019): nucleus
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27895226 (2016): plastid
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24872594 (2014): plastid
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22274653 (2012): plastid plastid stroma plastoglobules
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16461379 (2006): plastid plastid stroma plastoglobules
  • PMID:16414959 (2006): plastid plastid stroma plastoglobules
  • PMID:15322131 (2004): plastid
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SOUL heme-binding family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT5G20140.1); Has 1532 Blast hits to 1528 proteins in 169 species: Archae - 17; Bacteria - 184; Metazoa - 176; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 927 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHCFeggNOG:ENOG4111QRPEMBL:AC010927EMBL:AY099746
EMBL:BT020479EMBL:BT026078EMBL:CP002686EnsemblPlants:AT3G10130
EnsemblPlants:AT3G10130.1entrez:820176GeneID:820176GO:GO:0009507
GO:GO:0009535GO:GO:0010287Gramene:AT3G10130.1hmmpanther:PTHR11220
hmmpanther:PTHR11220:SF22HOGENOM:HOG000240036InParanoid:Q9SR77InterPro:IPR006917
InterPro:IPR011256KEGG:ath:AT3G10130OMA:DSQFRVKPANTHER:PTHR11220
PaxDb:Q9SR77Pfam:PF04832Pfam:Q9SR77PhylomeDB:Q9SR77
PRIDE:Q9SR77PRO:PR:Q9SR77ProteinModelPortal:Q9SR77Proteomes:UP000006548
RefSeq:NP_187624.1SMR:Q9SR77SUPFAM:SSF55136TAIR:AT3G10130
UniGene:At.28203UniProt:Q9SR77
Coordinates (TAIR10) chr3:-:3131122..3133158
Molecular Weight (calculated) 35037.20 Da
IEP (calculated) 9.72
GRAVY (calculated) -0.37
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMISSSSIT SSLSLLSSSP EKLPLINPIQ RCPITYSGFR TASVNRAIRR QPQSPAVSAT ESRVSLVLAL ASQASSVSQR LLADLAMETA KYVFPKRFDS
101: STNLEEAFMS VPDLETMNFR VLFRTDKYEI RQVEPYFVAE TIMPGETGFD SYGASKSFNV LAEYLFGKNT IKEKMEMTTP VVTRKVQSVG EKMEMTTPVI
201: TSKAKDQNQW RMSFVMPSKY GSNLPLPKDP SVKIQQVPRK IVAVVAFSGY VTDEEIERRE RELRRALQND KKFRVRDGVS FEVAQYNPPF TLPFMRRNEV
301: SLEVENKED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)