AT1G14130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14120.1); Has 6919 Blast hits to 6851 proteins in 822 species: Archae - 0; Bacteria - 798; Metazoa - 89; Fungi - 567; Plants - 4661; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:4836041..4837040 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34636.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.62 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 308 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGELNGVIIP TIDLEEVSDK ILNQKIREAS ERWGCFRVIN HGVSLSLMAE MKKTVIDLFQ RPYEVKVRNT DVLLGSGYRA PNEINPYYEA LGLYDMASPH 101: AVNTFCDQLE ASADQREIMV KYAKAINGLA TDLARKLAES YGLVETDFFK EWPSQFRINK YHFKPETVGK LGVQLHTDSG FLTILQDDEN VGGLEAMDNS 201: SGTFFPIDPL PNTLAINLGD MATIWSNGRL CNVKHRVQCK EATMRYSIAS FLLGPMDTDL EPPSEFVDAE HPRLYKPISH EGVRNIRMTK KLHDGEALKL 301: ITHAGLDK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)