AT1G12850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphoglycerate mutase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Uncharacterised conserved protein UCP036920, phosphoglycerate mutase, plant X4/Y4 (InterPro:IPR017070); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G26780.1); Has 1723 Blast hits to 1681 proteins in 525 species: Archae - 4; Bacteria - 974; Metazoa - 334; Fungi - 35; Plants - 147; Viruses - 2; Other Eukaryotes - 227 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:4380022..4381577 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44862.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.79 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||
| Length | 405 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSSQSSQLL DEEEEEEDEA ESEGEEVEEE EDEAESELNN RRIELDNLLV KKVLEQEPEM LPCHASASPL SPQLSSLGTP RIGPSIKVWD PYNVLAPPPP 101: SSPPLFSRIS SAAEHDRSAV TEVYFISHGE CDLNLRPDLI GGRCHVATLT PNGKRQARAL AVFLNSEGVR FTSVFSSPLD RARSMAVSVC QEMNFPEEHL 201: QVSDAVVEMS LGDWESCHRS EIYTPETLSL IERCQPDFSA PSGESLRQVE FRMVQFLNGT VSGLSEKLRS ELLPSTQHTN SRGFSLATSI HRPILTRKKS 301: GKSRFQVMNA TGDHEGSEEI FSNHNDEQHL GDINIKSSSS QLSTCIGVFT HSLPIKCLLT GILGCSPVMT HKICVEDSSV TVLQHSWKTG WQVKRLNDTA 401: HLRLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)