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AT1G12740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.589
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 87, subfamily A, polypeptide 2
Curator
Summary (TAIR10)
encodes a protein with cytochrome P450 domain
Computational
Description (TAIR10)
cytochrome P450, family 87, subfamily A, polypeptide 2 (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 31076 Blast hits to 30988 proteins in 1655 species: Archae - 56; Bacteria - 5533; Metazoa - 10873; Fungi - 5392; Plants - 7791; Viruses - 3; Other Eukaryotes - 1428 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G12740-MONOMERBioCyc:ARA:GQT-158-MONOMEReggNOG:COG2124eggNOG:KOG0157
EMBL:AK176324EMBL:BT010888EMBL:CP002684EnsemblPlants:AT1G12740
EnsemblPlants:AT1G12740.1entrez:837830ExpressionAtlas:Q6NPN1Gene3D:1.10.630.10
GeneID:837830GO:GO:0004497GO:GO:0005506GO:GO:0016705
GO:GO:0020037Gramene:AT1G12740.1hmmpanther:PTHR24286hmmpanther:PTHR24286:SF11
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972Pfam:PF00067
PhylomeDB:Q6NPN1PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086
Proteomes:UP000006548Reactome:R-ATH-211916Reactome:R-ATH-5365859RefSeq:NP_172734.2
scanprosite:PS00086SMR:Q6NPN1STRING:3702.AT1G12740.2SUPFAM:SSF48264
TAIR:AT1G12740tair10-symbols:CYP87A2TMHMM:TMhelixUniGene:At.42061
UniProt:Q6NPN1
Coordinates (TAIR10) chr1:+:4342462..4344569
Molecular Weight (calculated) 54355.10 Da
IEP (calculated) 9.66
GRAVY (calculated) -0.24
Length 472 amino acids
Sequence (TAIR10)
(BLAST)
001: MWALLIWVSL LLISITHWVY SWRNPKCRGK LPPGSMGFPL LGESIQFFKP NKTSDIPPFI KERVKKYGPI FKTNLVGRPV IVSTDADLSY FVFNQEGRCF
101: QSWYPDTFTH IFGKKNVGSL HGFMYKYLKN MVLTLFGHDG LKKMLPQVEM TANKRLELWS NQDSVELKDA TASMIFDLTA KKLISHDPDK SSENLRANFV
201: AFIQGLISFP FDIPGTAYHK CLQGRAKAMK MLRNMLQERR ENPRKNPSDF FDYVIEEIQK EGTILTEEIA LDLMFVLLFA SFETTSLALT LAIKFLSDDP
301: EVLKRLTEEH ETILRNREDA DSGLTWEEYK SMTYTFQFIN ETARLANIVP AIFRKALRDI KFKDYTIPAG WAVMVCPPAV HLNPEMYKDP LVFNPSRWEG
401: SKVTNASKHF MAFGGGMRFC VGTDFTKLQM AAFLHSLVTK YRWEEIKGGN ITRTPGLQFP NGYHVKLHKK RD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)