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AT1G11280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119990 Blast hits to 118206 proteins in 4416 species: Archae - 104; Bacteria - 13409; Metazoa - 44077; Fungi - 9917; Plants - 34701; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-630-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IH0T
EMBL:AC007259EMBL:AF083714EMBL:AY056250EMBL:AY062482
EMBL:CP002684EnsemblPlants:AT1G11280EnsemblPlants:AT1G11280.1EnsemblPlants:AT1G11280.2
entrez:837670ExpressionAtlas:Q9SXB3Gene3D:2.60.120.200Gene3D:2.90.10.10
GeneID:837670Genevisible:Q9SXB3GO:GO:0004674GO:GO:0005516
GO:GO:0005524GO:GO:0005886GO:GO:0016021GO:GO:0030246
GO:GO:0048544hmmpanther:PTHR27002hmmpanther:PTHR27002:SF84HOGENOM:HOG000116559
InParanoid:Q9SXB3InterPro:IPR000719InterPro:IPR000858InterPro:IPR001245
InterPro:IPR001480InterPro:IPR003609InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR021820InterPro:IPR024171KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1OMA:IITSEGYPaxDb:Q9SXB3Pfam:PF00954
Pfam:PF01453Pfam:PF07714Pfam:PF08276Pfam:PF11883
Pfam:Q9SXB3Pfscan:PS50011Pfscan:PS50927Pfscan:PS50948
Pfscan:PS51257PhylomeDB:Q9SXB3PIR:G86246PIRSF:PIRSF000641
PRIDE:Q9SXB3PRO:PR:Q9SXB3PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50927PROSITE:PS50948ProteinModelPortal:Q9SXB3Proteomes:UP000006548
RefSeq:NP_563887.1RefSeq:NP_849636.1RefSeq:NP_849637.1scanprosite:PS00108
SMART:SM00108SMART:SM00220SMART:SM00473SMR:Q9SXB3
STRING:3702.AT1G11280.1SUPFAM:SSF51110SUPFAM:SSF56112TAIR:AT1G11280
TMHMM:TMhelixUniGene:At.26349UniProt:Q9SXB3
Coordinates (TAIR10) chr1:-:3787456..3790728
Molecular Weight (calculated) 92573.30 Da
IEP (calculated) 8.11
GRAVY (calculated) -0.11
Length 830 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLKENSFEH MGIHLGEIGI VLFPWFLWLS LFLSCGYAAI TISSPLTLGQ TLSSPGGFYE LGFFSPNNSQ NQYVGIWFKK ITPRVVVWVA NREKPITTPV
101: ANLTISRNGS LILLDSSKNV VWSTRRPSIS NKCHAKLLDT GNLVIVDDVS ENLLWQSFEN PGDTMLPYSS LMYNLATGEK RVLSSWKSHT DPSPGDFVVR
201: LTPQVPAQIV TMRGSSVYKR SGPWAKTGFT GVPLMDESYT SPFSLSQDVG NGTGLFSYLQ RSSELTRVII TSEGYLKTFR YNGTGWVLDF ITPANLCDLY
301: GACGPFGLCV TSNPTKCKCM KGFVPKYKEE WKRGNMTSGC MRRTELSCQA NLSTKTQGKG VDVFYRLANV KPPDLYEYAS FVDADQCHQG CLSNCSCSAF
401: AYITGIGCLL WNHELIDTIR YSVGGEFLSI RLASSELAGS RRTKIIVGSI SLSIFVILAF GSYKYWRYRA KQNVGPTWAF FNNSQDSWKN GLEPQEISGL
501: TFFEMNTIRA ATNNFNVSNK LGQGGFGPVY KGTLSDKKDI AVKRLSSSSG QGTEEFMNEI KLISKLQHRN LVRLLGCCID GEEKLLIYEF LVNKSLDTFL
601: FDLTLKLQID WPKRFNIIQG VSRGLLYLHR DSCMRVIHRD LKVSNILLDD KMNPKISDFG LARMFQGTQH QDNTRKVVGT LGYMSPEYAW TGMFSEKSDI
701: YAFGVLLLEI ISGKKISSFC CGEEGKTLLG HAWECWLETG GVDLLDEDIS SSCSPVEVEV ARCVQIGLLC IQQQAVDRPN IAQVVTMMTS ATDLPRPKQP
801: LFALQIQDQE SVVSVSKSVN HVTQTEIYGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)