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AT1G08710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : F-box family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
F-box family protein; Has 132 Blast hits to 132 proteins in 42 species: Archae - 3; Bacteria - 4; Metazoa - 68; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G08710EnsemblPlants:AT1G08710.1entrez:837392hmmpanther:PTHR15537
hmmpanther:PTHR15537:SF5ncoils:CoilSUPFAM:SSF57997
Coordinates (TAIR10) chr1:+:2771720..2773250
Molecular Weight (calculated) 31894.30 Da
IEP (calculated) 10.26
GRAVY (calculated) -0.73
Length 274 amino acids
Sequence (TAIR10)
(BLAST)
001: MSANEIPDEL WRKILEIGVK SSTFSYKDLC CISISSRRLF RLSCDDSLWD LLLVHDFPNH IVSASSSSES PTKFIYMTRF EREKERKLAA HRRALLRKES
101: EISEWGRRIR ELEARLSDEA ERLQSSSLQF SDLLKVRQAS VALNVWQPEV VRGRQKQMVE QNAVPVEGRL RALEMEMKLC KQQIMGLNRA LREVKHRYDI
201: AIKELESMKY HPLRDYKSIR NGDQGSNGKT KKLKTSINYS GDQVSNGKRR KLKTSIDFPA KPRNTEKLFQ SESE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)