AT4G15030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:8578989..8581180 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 33208.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.10 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.63 | ||||||||||||||||||||||||
| Length | 278 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSSAAIRSD IYDREERKQQ YQAHIRGLNA YERHKKFLKD YVRFYGKDKP AEVKLPVKTD QDTLREGYRF IRSEEDDLDP SWEQRLVKRY YDKLFKEYCI 101: ADMSRYKTGK MGLRWRTEKE VMTGKGQFMC GSKHCDEKEG LASYEVNFSY HEAGEDKQAL VKLVACERCA EKLYYKKRKE GERSESKEKK KQKRKRSKSH 201: SEDDTDEEEK RKEGERSESN EKKKQKRNRS QSHSEYDTDE EDRRKGKTRK SKLESADREG KDDENFDEYM EGMFPGNG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)