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AT1G08500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : early nodulin-like protein 18
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
early nodulin-like protein 18 (ENODL18); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G31050.1); Has 799 Blast hits to 788 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 799; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWTSeggNOG:ENOG410YIBREMBL:AC006932EMBL:AF370470
EMBL:AY064634EMBL:CP002684EMBL:U76300EnsemblPlants:AT1G08500
EnsemblPlants:AT1G08500.1entrez:837371Gene3D:2.60.40.420GeneID:837371
GO:GO:0009055GO:GO:0031225GO:GO:0046658Gramene:AT1G08500.1
hmmpanther:PTHR33021hmmpanther:PTHR33021:SF41HOGENOM:HOG000237775InterPro:IPR003245
InterPro:IPR008972KEGG:ath:AT1G08500OMA:DYQAWADPfam:PF02298
Pfscan:PS51485PhylomeDB:O82083PIR:A86218PROSITE:PS51485
Proteomes:UP000006548RefSeq:NP_563820.1SMR:O82083STRING:3702.AT1G08500.1
SUPFAM:SSF49503TAIR:AT1G08500tair10-symbols:AtENODL18tair10-symbols:ENODL18
UniGene:At.10756UniProt:O82083
Coordinates (TAIR10) chr1:+:2689110..2689881
Molecular Weight (calculated) 24905.30 Da
IEP (calculated) 4.09
GRAVY (calculated) -0.44
Length 228 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPSCSSCVN VLLIMCLMLL SLSADAYKNY TVGESTGWFD IQERPSANYQ KWADSKSFSL GDFLIFNTDS NHSVVQTYDF KTYKDCDYDN NENNDTTEWS
101: AANPSATSPV PVSISVPLVK EGSNYFFSGN YDGEQCKFGQ HFMINVTHGQ GLPDSSSPDD AAAPGPSESS QSGDDEVAPD TIVPANFDHP KDIESADDDK
201: EVHSKKSSSS TTKTSLFCFV FMGLFASF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)