AT1G08030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.547 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : tyrosylprotein sulfotransferase | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a tyrosylprotein sulfotransferase (TPST). This protein is a 500-aa type I transmembrane protein that shows no sequence similarity to animal TPSTs. Activity confirmed by protein expression in yeast. TPST is expressed throughout the plant body, and the highest levels of expression are in the root apical meristem. A loss-of-function mutant TPST displayed a marked dwarf phenotype accompanied by stunted roots, pale green leaves, reduction in higher order veins, early senescence, and a reduced number of flowers and siliques. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
tyrosylprotein sulfotransferase (TPST); FUNCTIONS IN: protein-tyrosine sulfotransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulfotransferase (InterPro:IPR005331), Heparan sulphate 6-sulfotransferase (InterPro:IPR010635); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2489575..2492741 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56992.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 500 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQMNSVWKLS LGLLLLSSVI GSFAELDFGH CETLVKKWAD SSSSREEHVN KDKRSLKDLL FFLHVPRTGG RTYFHCFLRK LYDSSEECPR SYDKLHFNPR 101: KEKCKLLATH DDYSLMAKLP RERTSVMTIV RDPIARVLST YEFSVEVAAR FLVHPNLTSA SRMSSRIRKS NVISTLDIWP WKYLVPWMRE DLFARRDARK 201: LKEVVIIEDD NPYDMEEMLM PLHKYLDAPT AHDIIHNGAT FQIAGLTNNS HLSEAHEVRH CVQKFKSLGE SVLQVAKRRL DSMLYVGLTE EHRESASLFA 301: NVVGSQVLSQ VVPSNATAKI KALKSEASVT ISETGSDKSN IQNGTSEVTL NKAEAKSGNM TVKTLMEVYE GCITHLRKSQ GTRRVNSLKR ITPANFTRGT 401: RTRVPKEVIQ QIKSLNNLDV ELYKYAKVIF AKEHELVSNK LISSSKRSIV DLPSELKSVL GEMGEEKLWK FVPVALMLLL IVLFFLFVNA KRRRTSKVKI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)