AT1G06660.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13; Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:2037461..2040148 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53144.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.20 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.63 | ||||||||||||||||||||||||||||||||
| Length | 481 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRRLLMNRNL SPLCRSVLRF IDLSVCRAMA CFLDCFRARD NRSTSNLVSH SSLANSRKAQ DSQNDLSALF LSEEKSASSP CLDKERFDLD SIHIDKGLRD 101: EARFLKACGT IPETPIEIRK ASQKLSPQHS GSSHFHSWIS SSSSMGSRLA ESSTPMKACE EVGRPSFTSE QTASSCVIDV RDNARISSAS SDGTEVESVG 201: TAIKGELDRT ARPTFTAGKN KSVRFECDLD QSNSSNSSEN GSSRKPEMGG KICFTVSSPN PTPLKLSDEM QTPGTIYPAN MESGGRGRPR IRSQFVHSVS 301: NIMENASLYK VYKDSHEGLD YEEQIEAETP SSETYGEKVE ESSDEKLSKF EASFSPWLNQ INENIAALNE RTPGVGVITP GDRPIIGLVA AQWIENEQTE 401: ISPKMWDGNG IPNSTTKYKE DQKVSWHATP FEVRLEKALS EEGGQSLFPQ RKLEVMMEEV EGDTDISQLH HSVQPNSVVS F |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)