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AT1G06390.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.864
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GSK3/SHAGGY-like protein kinase 1
Curator
Summary (TAIR10)
encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.
Computational
Description (TAIR10)
GSK3/SHAGGY-like protein kinase 1 (GSK1); FUNCTIONS IN: kinase activity, glycogen synthase kinase 3 activity; INVOLVED IN: brassinosteroid mediated signaling pathway, protein amino acid phosphorylation, hyperosmotic salinity response, regulation of protein localization; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: SHAGGY-related protein kinase dZeta (TAIR:AT2G30980.1); Has 107835 Blast hits to 106562 proteins in 3623 species: Archae - 81; Bacteria - 10704; Metazoa - 38361; Fungi - 11903; Plants - 28114; Viruses - 380; Other Eukaryotes - 18292 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G06390-MONOMERBioCyc:ARA:GQT-1980-MONOMERBioGrid:22391BRENDA:2.7.11.26
EC:2.7.11.1eggNOG:COG0515eggNOG:KOG0658EMBL:AC068143
EMBL:AF019927EMBL:AY035048EMBL:AY051053EMBL:CP002684
EMBL:X99696EnsemblPlants:AT1G06390EnsemblPlants:AT1G06390.1EnsemblPlants:AT1G06390.2
entrez:837150GeneID:837150Genevisible:Q39012GO:GO:0004674
GO:GO:0005524GO:GO:0005829GO:GO:0005886GO:GO:0006468
GO:GO:0009742GO:GO:0032880GO:GO:0042538GO:GO:0046777
Gramene:AT1G06390.1Gramene:AT1G06390.2hmmpanther:PTHR24057hmmpanther:PTHR24057:SF12
HOGENOM:HOG000233017InParanoid:Q39012IntAct:Q39012InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G06390
OMA:HDGDALKPaxDb:Q39012Pfam:PF00069Pfam:Q39012
Pfscan:PS50011PhylomeDB:Q39012PIR:S77922PRIDE:Q39012
PRO:PR:Q39012PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q39012Proteomes:UP000006548Reactome:R-ATH-3371453RefSeq:NP_172127.1
RefSeq:NP_973771.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q39012STRING:3702.AT1G06390.1SUPFAM:SSF56112TAIR:AT1G06390
tair10-symbols:ATGSK1tair10-symbols:ATSK2-3tair10-symbols:ATSK22tair10-symbols:BIL2
tair10-symbols:GSK1tair10-symbols:SK22UniGene:At.133UniGene:At.24592
UniProt:Q39012
Coordinates (TAIR10) chr1:+:1946860..1950417
Molecular Weight (calculated) 46026.90 Da
IEP (calculated) 8.46
GRAVY (calculated) -0.25
Length 407 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)