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AT1G06130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23444301 (2013): mitochondrion mitochondrial matrix
  • PMID:23444301 (2013): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:22540835 (2012): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:20423899 (2010): plastid
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glyoxalase 2-4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glyoxalase 2-4 (GLX2-4); FUNCTIONS IN: hydrolase activity, zinc ion binding, hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-5 (TAIR:AT2G31350.1); Has 15456 Blast hits to 15455 proteins in 2500 species: Archae - 395; Bacteria - 9969; Metazoa - 478; Fungi - 329; Plants - 213; Viruses - 0; Other Eukaryotes - 4072 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G06130-MONOMERBioCyc:ARA:GQT-2847-MONOMERBioGrid:22364EC:3.1.2.6
eggNOG:ENOG410IU4VeggNOG:ENOG4111FEZEMBL:AC024174EMBL:AK227097
EMBL:AY085754EMBL:AY099584EMBL:AY128833EMBL:CP002684
EnsemblPlants:AT1G06130EnsemblPlants:AT1G06130.1entrez:837122Gene3D:3.60.15.10
GeneID:837122Genevisible:Q8LDW8GO:GO:0004416GO:GO:0009507
GO:GO:0019243GO:GO:0046872gramene_pathway:3.1.2.6gramene_pathway:PWY-5386
HAMAP:MF_01374hmmpanther:PTHR11935hmmpanther:PTHR11935:SF7HOGENOM:HOG000058041
InParanoid:Q8LDW8IntAct:Q8LDW8InterPro:IPR001279InterPro:IPR017782
InterPro:IPR032282KEGG:00620+3.1.2.6KEGG:ath:AT1G06130KO:K01069
OMA:LRVDQFCPaxDb:Q8LDW8Pfam:PF00753Pfam:PF16123
Pfam:Q8LDW8PhylomeDB:Q8LDW8PIR:F86196PRIDE:Q8LDW8
PRO:PR:Q8LDW8ProteinModelPortal:Q8LDW8Proteomes:UP000006548RefSeq:NP_563760.1
RefSeq:NP_849599.1SMART:SM00849SMR:Q8LDW8STRING:3702.AT1G06130.1
SUPFAM:SSF56281TAIR:AT1G06130tair10-symbols:GLX2-4TIGRfam:TIGR03413
TIGRFAMs:TIGR03413UniGene:At.26891UniPathway:UPA00619UniProt:Q8LDW8
Coordinates (TAIR10) chr1:-:1858034..1860640
Molecular Weight (calculated) 36626.90 Da
IEP (calculated) 8.22
GRAVY (calculated) -0.21
Length 331 amino acids
Sequence (TAIR10)
(BLAST)
001: MQAISKVSSA ASFFRCSRKL VSQPCVRPCV RQLHVRKGLV SGVMKLFSSP LRTLRDAGKS VRISRFCSVS NVSSSLQIEL VPCLTDNYAY ILHDEDTGTV
101: GVVDPSEAVP VMDALQKNSR NLTYILNTHH HYDHTGGNLE LKDRYGAKVI GSAADRDRIP GIDVALKDAD KWMFAGHEVH IMETPGHTRG HISFYFPGAR
201: AIFTGDTLFS LSCGKLFEGT PEQMLASLQR IIALPDDTSV YCGHEYTLSN SKFALSIEPT NEVLQSYAAY VAELRDKKLP TIPTTMKMEK ACNPFLRTEN
301: TDIRRALGIP ETADEAEALG IIRRAKDNFK A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)