AT1G03740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G44290.4); Has 123601 Blast hits to 122225 proteins in 4475 species: Archae - 82; Bacteria - 13399; Metazoa - 46732; Fungi - 12742; Plants - 30380; Viruses - 449; Other Eukaryotes - 19817 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:934055..936792 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84482.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.01 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.70 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 740 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCVNSRHRP FRRKSTTLKE SSEEKRSSRI DSSRRIDDWI QPEDGFDRLS NSGDAKVRLI ESEMFSTSRC HDHQIGKILE NPATVAHMDR VVHDQELRRA 101: SSAVVDSDLD IDPKVVKAKL DRWNSKDSKV RLIESEKLSS SMFSEHHQIE KGVEKPEVEA SVRVVHRELK RGSSIVSPKD AERKQVAAGW PSWLVSVAGE 201: SLVDWAPRRA NTFEKLEKIG QGTYSSVYRA RDLLHNKIVA LKKVRFDLND MESVKFMARE IIVMRRLDHP NVLKLEGLIT APVSSSLYLV FEYMDHDLLG 301: LSSLPGVKFT EPQVKCYMRQ LLSGLEHCHS RGVLHRDIKG SNLLIDSKGV LKIADFGLAT FFDPAKSVSL TSHVVTLWYR PPELLLGASH YGVGVDLWST 401: GCILGELYAG KPILPGKTEV EQLHKIFKLC GSPTENYWRK QKLPSSAGFK TAIPYRRKVS EMFKDFPASV LSLLETLLSI DPDHRSSADR ALESEYFKTK 501: PFACDPSNLP KYPPSKEIDA KMRDEAKRQQ PMRAEKQERQ DSMTRISHER KFVPPVKANN SLSMTMEKQY KDLRSRNDSF KSFKEERTPH GPVPDYQNMQ 601: HNRNNQTGVR ISHSGPLMSN RNMAKSTMHV KENALPRYPP ARVNPKMLSG SVSSKTLLER QDQPVTNQRR RDRRAYNRAD TMDSRHMTAP IDPSWYNPSD 701: SKIYMSGPLL AQPSRVDQML EEHDRQLQEF NRQALKTPQG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)