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AT1G03220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:25805245 (2015): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid
  • PMID:24393051 (2015): extracellular region
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22430844 (2012): Golgi
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21109274 (2011): extracellular region
  • PMID:19334764 (2009): plasma membrane
  • PMID:18998720 (2009): extracellular region
  • PMID:16729891 (2006): extracellular region
  • PMID:16618929 (2006): plasma membrane
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
  • PMID:14595688 (2003): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03230.1); Has 1398 Blast hits to 1391 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1396; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AC005278EMBL:AF325092
EMBL:AY035026EMBL:AY059098EMBL:CP002684EnsemblPlants:AT1G03220
EnsemblPlants:AT1G03220.1entrez:838517Gene3D:2.40.70.10GeneID:838517
GO:GO:0004190GO:GO:0005618GO:GO:0005794GO:GO:0005886
GO:GO:0009505GO:GO:0009506GO:GO:0009651GO:GO:0016020
Gramene:AT1G03220.1hmmpanther:PTHR13683hmmpanther:PTHR13683:SF379InterPro:IPR001461
InterPro:IPR021109InterPro:IPR032799InterPro:IPR032861InterPro:IPR033121
KEGG:ath:AT1G03220OMA:YITHINQPANTHER:PTHR13683Pfam:PF14541
Pfam:PF14543Pfscan:PS51767PhylomeDB:Q9ZVS4PIR:F86163
PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_171821.1SMR:Q9ZVS4
STRING:3702.AT1G03220.1SUPFAM:SSF50630SwissPalm:Q9ZVS4TAIR:AT1G03220
UniGene:At.25184UniProt:Q9ZVS4
Coordinates (TAIR10) chr1:+:787143..788444
Molecular Weight (calculated) 45719.90 Da
IEP (calculated) 8.78
GRAVY (calculated) 0.24
Length 433 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)