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AT5G65010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : asparagine synthetase 2
Curator
Summary (TAIR10)
Encodes asparagine synthetase (ASN2).
Computational
Description (TAIR10)
asparagine synthetase 2 (ASN2); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 12695 Blast hits to 12327 proteins in 2309 species: Archae - 403; Bacteria - 7898; Metazoa - 213; Fungi - 273; Plants - 424; Viruses - 7; Other Eukaryotes - 3477 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-858-MONOMEREC:6.3.5.4eggNOG:COG0367eggNOG:KOG0571EMBL:AB019236EMBL:AF095453EMBL:AF367340
EMBL:AY124866EMBL:CP002688EnsemblPlants:AT5G65010EnsemblPlants:AT5G65010.1entrez:836625Gene3D:3.40.50.620Gene3D:3.60.20.10
GeneID:836625Genevisible:Q9LV77GO:GO:0004066GO:GO:0005524GO:GO:0006541GO:GO:0070981gramene_pathway:6.3.5.4
gramene_pathway:ASPARAGINE-BIOSYNTHESISgramene_plant_reactome:1119354gramene_plant_reactome:1119553gramene_plant_reactome:6875127gramene_plant_reactome:6875656hmmpanther:PTHR11772hmmpanther:PTHR11772:SF13
HOGENOM:HOG000027493InParanoid:Q9LV77InterPro:IPR001962InterPro:IPR006426InterPro:IPR014729InterPro:IPR017932InterPro:IPR029055
iPTMnet:Q9LV77KEGG:00250+6.3.5.4KEGG:ath:AT5G65010KO:K01953MEROPS:C44.976OMA:TRHHEFQPaxDb:Q9LV77
Pfam:PF00733Pfam:PF13537Pfam:Q9LV77Pfscan:PS51278PhylomeDB:Q9LV77PRIDE:Q9LV77PRO:PR:Q9LV77
ProMEX:Q9LV77PROSITE:PS51278ProteinModelPortal:Q9LV77Proteomes:UP000006548Reactome:R-ATH-70614RefSeq:NP_201306.2RefSeq:NP_851272.1
SMR:Q9LV77STRING:3702.AT5G65010.2SUPFAM:SSF52402SUPFAM:SSF56235TAIR:AT5G65010tair10-symbols:ASN2TIGRfam:TIGR01536
TIGRFAMs:TIGR01536UniGene:At.67717UniGene:At.7860UniPathway:UPA00134UniProt:Q9LV77
Coordinates (TAIR10) chr5:+:25969224..25972278
Molecular Weight (calculated) 65033.30 Da
IEP (calculated) 6.43
GRAVY (calculated) -0.34
Length 578 amino acids
Sequence (TAIR10)
(BLAST)
001: MCGILAVLGC IDNSQAKRSR IIELSRRLRH RGPDWSGLHC YEDCYLAHER LAIIDPTSGD QPLYNEDKTV AVTVNGEIYN HKILREKLKS HQFRTGSDCE
101: VIAHLYEEHG EEFIDMLDGM FAFVLLDTRD KSFIAARDAI GITPLYIGWG LDGSVWFASE MKALSDDCEQ FMSFPPGHIY SSKQGGLRRW YNPPWYNEQV
201: PSTPYDPLVL RNAFEKAVIK RLMTDVPFGV LLSGGLDSSL VAAVALRHLE KSEAARQWGS QLHTFCIGLQ GSPDLKAGRE VADYLGTRHH EFQFTVQDGI
301: DAIEEVIYHI ETYDVTTIRA STPMFLMSRK IKSLGVKMVL SGEGSDEILG GYLYFHKAPN KKEFHEETCR KIKALHQFDC LRANKSTSAW GVEARVPFLD
401: KEFLNVAMSI DPEWKLIKPD LGRIEKWVLR NAFDDEERPY LPKHILYRQK EQFSDGVGYS WIDGLKDHAN KHVSDTMLSN ASFVFPDNTP LTKEAYYYRT
501: IFEKFFPKSA ARATVPGGPS IACSTAKAVE WDATWSKNLD PSGRAALGVH VAAYEEDKAA AAAKAGSDLV DPLPKNGT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)