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AT5G64620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16356755 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cell wall / vacuolar inhibitor of fructosidase 2
Curator
Summary (TAIR10)
Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.
Computational
Description (TAIR10)
cell wall / vacuolar inhibitor of fructosidase 2 (C/VIF2); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: cell wall / vacuolar inhibitor of fructosidase 1 (TAIR:AT1G47960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:21825eggNOG:ENOG410IZ37eggNOG:ENOG410YWNREMBL:AB010076EMBL:AY086575EMBL:BT003882EMBL:BT004919
EMBL:CP002688EMBL:Y12807EnsemblPlants:AT5G64620EnsemblPlants:AT5G64620.1entrez:836583Gene3D:1.20.140.40GeneID:836583
Genevisible:O49603GO:GO:0004857GO:GO:0005773GO:GO:0043086GO:GO:0080167Gramene:AT5G64620.1hmmpanther:PTHR31080
hmmpanther:PTHR31080:SF1HOGENOM:HOG000242541InParanoid:O49603InterPro:IPR006501iPTMnet:O49603KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11
KEGG:ath:AT5G64620OMA:TIIESTCPaxDb:O49603Pfam:O49603Pfam:PF04043PhylomeDB:O49603PRIDE:O49603
PRO:PR:O49603ProteinModelPortal:O49603Proteomes:UP000006548RefSeq:NP_201267.1SMART:SM00856SMR:O49603STRING:3702.AT5G64620.1
SUPFAM:SSF101148TAIR:AT5G64620tair10-symbols:ATC/VIF2tair10-symbols:C/VIF2TIGRfam:TIGR01614TIGRFAMs:TIGR01614UniGene:At.25570
unipathway:UPA00545UniProt:O49603
Coordinates (TAIR10) chr5:+:25831875..25832417
Molecular Weight (calculated) 19634.70 Da
IEP (calculated) 8.70
GRAVY (calculated) 0.10
Length 180 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSLIFLLL VTLTFSASTL ISAKSNTTTI IESTCKTTNY YKFCVSALKS DPRSPTADTK GLASIMVGVG MTNATSTANY IAGNLSATVK DTVLKKVLQD
101: CSEKYALAAD SLRLTIQDLD DEAYDYASMH VLAAQDYPNV CRNIFRRVKG LAYPVEIRRR EASLRRICGV VSGILDRLVE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)