AT5G43900.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.774 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:17657241..17667413 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 176532.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.97 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1562 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MFLDAAKSDS RFSVCVCDTV LLYVYHVNKT KSPQKVEESR EARKGKNKIQ KAEVFDLRNE MVANFNPSVG SFVWVEDPDE AWIDGEVVQV NGDEIKVLCT 0101: SGKHVVTKIS NAYPKDVEAP ASGVDDMTRL AYLHEPGVLQ NLHSRYDINE IYTYTGSILI AVNPFRRLPH LYSSHMMAQY KGASLGELSP HPFAVADAAY 0201: RQMINDGVSQ SILVSGESGA GKTESTKLLM RYLAYMGGRA AAEGRSVEQK SNPVLEAFGN AKTVRNNNSS RFGKFVEIQF DEKGRISGAA IRTYLLERSR 0301: VCQVSDPERN YHCFYMLCAA PQEDVKKFKL EEPKKYHYLN QSKCLELDSI NDAEEYHATR RAMDVVGIST EEQDAIFSVV AAILHIGNIE FAKGEEIDSS 0401: IPKDDKSLFH LKTAAELLSC DEKALEDSLC KRIMVTRDET ITKTLDPEAA TLSRDALAKV MYSRLFDWLV DKINSSIGQD HDSKYLIGVL DIYGFESFKT 0501: NSFEQFCINL TNEKLQQHFN QHVFKMEQEE YKKEEINWSY IEFVDNQDIL DLIEKKPGGI IALLDEACMF PRSTHETFAQ KLYQTFKTHK RFTKPKLARS 0601: DFTICHYAGD VTYQTELFLD KNKDYVIAEH QALLNSSSCS FVASLFPPMS DDSKQSKFSS IGTRFKQQLV SLLEILNTTE PHYIRCIKPN NLLKPGIFEN 0701: ENILQQLRCG GVMEAIRISC AGYPTRKHFD EFLARFGILA PEVLVKNSDD PAACKKLLDK VGLEGYQIGK TKVFLRAGQM ADLDTRRTEV LGRSASIIQR 0801: KVRSYLAKKS FIVLRNSAKQ IQSVCRGYLA RSVYEGMRRE AAALKIQRDL RRFLARKAYT ELYSAAVSVQ AGMRGMVARK ELCFRRQTKA AIIIQTWCRG 0901: YLARLHYRKL KKAAITTQCA WRSKVARGEL RKLKMAARET GALQAAKNKL EKQVEELTWR LQLEKRIRTD LEEAKKQESA KAQSSLEELQ LKCKETEALL 1001: IKEREAAKKI AETAPIIKEI PVVDQELMDK ITNENEKLKS MVSSLEMKIG ETEKKLQETT KISQDRLNQA LEAESKLVKL KTAMQRLEEK ILDMEAEKKI 1101: MHQQTISTPV RTNLGHPPTA PVKNLENGHQ TNLEKEFNEA EFTTPVDGKA GKSAAERQIM NVDALIDCVK DNIGFSNGKP VAAFTIYKCL LHWKCFESEK 1201: TNVFDRLIQM IGSAIENEDD NSHLAYWLTS TSALLFLLQK SLKTNGSGAT QSKKPPASTS LFGRMAMSFR SSPASGNLAA AAEAAALAVV RPVEAKYPAL 1301: LFKQQLAAYV EKMFGMVRDN LKRELSTLLS LCIQAPRSSK GGMLRSGRSF GKDSPAVHWQ SIIDGLNSLL VTLKENHVPL VLIQKIYSQT FSYINVQLFN 1401: SLLLRKECCT FSNGEFVKSG LAELELWCCQ AKEYSGPSWE ELKHIRQAVG FLVIHQKYRI SYDEIANDLC PVLSVQQLYR ICTLYWDDSY NTRSVSQEVI 1501: SSMRTLMTEE SNDADSDSFL LDDDSSIPFS IDDISSSMEE KDFVGIKPAE ELLENPAFVF LH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)