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AT1G59820.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
golgi 0.500
plasma membrane 0.500
ASURE: golgi,plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:22923678 (2012): Golgi
  • PMID:22318864 (2012): plasma membrane
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aminophospholipid ATPase 3
Curator
Summary (TAIR10)
Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.
Computational
Description (TAIR10)
aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G59820-MONOMERBioGrid:27500BRENDA:3.6.99.B1EC:3.6.3.1
eggNOG:ENOG410ITKDeggNOG:ENOG410XPYKEMBL:AC007258EMBL:AY091777
EMBL:CP002684EnsemblPlants:AT1G59820EnsemblPlants:AT1G59820.1entrez:842275
Gene3D:2.70.150.10Gene3D:3.40.1110.10Gene3D:3.40.50.1000GeneID:842275
Genevisible:Q9XIE6GO:GO:0000139GO:GO:0000287GO:GO:0004012
GO:GO:0005524GO:GO:0005548GO:GO:0005768GO:GO:0005789
GO:GO:0005794GO:GO:0005802GO:GO:0005886GO:GO:0016021
GO:GO:0045332GO:GO:0048194GO:GO:0048364GO:GO:0048367
Gramene:AT1G59820.1hmmpanther:PTHR24092hmmpanther:PTHR24092:SF85HOGENOM:HOG000202528
InParanoid:Q9XIE6InterPro:IPR001757InterPro:IPR006539InterPro:IPR008250
InterPro:IPR018303InterPro:IPR023214InterPro:IPR023299InterPro:IPR032630
InterPro:IPR032631iPTMnet:Q9XIE6KEGG:ath:AT1G59820KO:K14802
ncoils:CoilOMA:CKELFRCPANTHER:PTHR24092PaxDb:Q9XIE6
Pfam:PF00122Pfam:PF12710Pfam:PF16209Pfam:PF16212
Pfam:Q9XIE6PhylomeDB:Q9XIE6PIR:C96622PRIDE:Q9XIE6
PRO:PR:Q9XIE6PROSITE:PS00154ProteinModelPortal:Q9XIE6Proteomes:UP000006548
Reactome:R-ATH-936837RefSeq:NP_176191.1scanprosite:PS00154STRING:3702.AT1G59820.1
SUPFAM:0049471SUPFAM:0049473SUPFAM:SSF56784SUPFAM:SSF81660
TAIR:AT1G59820tair10-symbols:ALA3TCDB:3.A.3.8.6TIGRfam:TIGR01494
TIGRfam:TIGR01652TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelix
UniGene:At.36777UniProt:Q9XIE6
Coordinates (TAIR10) chr1:+:22011599..22020023
Molecular Weight (calculated) 137760.00 Da
IEP (calculated) 7.73
GRAVY (calculated) -0.05
Length 1213 amino acids
Sequence (TAIR10)
(BLAST)
0001: MVRSGSFSVD SSATHQRTPS RTVTLGHIQP QAPTYRTVYC NDRESNQPVR FKGNSISTTK YNVFTFLPKG LFEQFRRIAN IYFLGISCLS MTPISPVSPI
0101: TNVAPLSMVL LVSLIKEAFE DWKRFQNDMS INNSTVEILQ DQQWVSIPWR KLQVGDIVKI KKDGFFPADI LFMSSTNSDG ICYVETANLD GETNLKIRKA
0201: LERTWDYLVP EKAYEFKGEI QCEQPNNSLY TFTGNLVVQK QTLPLSPDQL LLRGCSLRNT EYIVGAVVFT GHETKVMMNA MNAPSKRSTL EKKLDKLIIT
0301: IFCVLVTMCL IGAIGCSIVT DREDKYLGLH NSDWEYRNGL MIGFFTFFTL VTLFSSIIPI SLYVSIEMIK FIQSTQFINR DLNMYHAETN TPASARTSNL
0401: NEELGQVEYI FSDKTGTLTR NLMEFFKCSI GGVSYGCGVT EIEKGIAQRH GLKVQEEQRS TGAIREKGFN FDDPRLMRGA WRNEPNPDLC KELFRCLAIC
0501: HTVLPEGDES PEKIVYQAAS PDEAALVTAA KNFGFFFYRR TPTMVYVRES HVEKMGKIQD VAYEILNVLE FNSTRKRQSV VCRFPDGRLV LYCKGADNVI
0601: FERLANGMDD VRKVTREHLE HFGSSGLRTL CLAYKDLNPE TYDSWNEKFI QAKSALRDRE KKLDEVAELI EKDLILIGST AIEDKLQEGV PTCIETLSRA
0701: GIKIWVLTGD KMETAINIAY ACNLINNEMK QFVISSETDA IREAEERGDQ VEIARVIKEE VKRELKKSLE EAQHSLHTVA GPKLSLVIDG KCLMYALDPS
0801: LRVMLLSLSL NCTSVVCCRV SPLQKAQVTS LVRKGAQKIT LSIGDGANDV SMIQAAHVGI GISGMEGMQA VMASDFAIAQ FRFLTDLLLV HGRWSYLRIC
0901: KVVMYFFYKN LTFTLTQFWF TFRTGFSGQR FYDDWFQSLF NVVFTALPVI VLGLFEKDVS ASLSKRYPEL YREGIRNSFF KWRVVAVWAT SAVYQSLVCY
1001: LFVTTSSFGA VNSSGKVFGL WDVSTMVFTC LVIAVNVRIL LMSNSITRWH YITVGGSILA WLVFAFVYCG IMTPHDRNEN VYFVIYVLMS TFYFYFTLLL
1101: VPIVSLLGDF IFQGVERWFF PYDYQIVQEI HRHESDASKA DQLEVENELT PQEARSYAIS QLPRELSKHT GFAFDSPGYE SFFASQLGIY APQKAWDVAR
1201: RASMRSRPKV PKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)