AT5G18280.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : apyrase 2 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:6050799..6054875 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68650.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.94 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||
| Length | 630 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLNIVGSYPS PAIVTHNVFC LHPSLSHTKF RSEAHTSFGF QIKSGDSSRF PKFTVDLEPL QDPPQTTASS GTGNGNGKIR YRSPSSTELL ESGNHSPTSD 101: SVDGGKMTAK RGIGRHESLA DKIQRHRGII LVISVPIVLI GLVLLLMPGR SISDSVVEEY SVHNRKGGPN SRGPKNYAVI FDAGSSGSRV HVYCFDQNLD 201: LIPLGNELEL FLQSLVKKLA SPNGSNRANM TLFDHGNISC PEVKLNRING KLRTLLSMYI IDLCSLKPGL SAYPTDPRQA ANSLVSLLDK AEASVPRELR 301: PKTHVRVGAT AGLRTLGHDA SENILQAVRE LLRDRSMLKT EANAVTVLDG TQEGSYQWVT INYLLRNLGK PYSDTVGVVD LGGGSVQMAY AISEEDAASA 401: PKPLEGEDSY VREMYLKGRK YFLYVHSYLH YGLLAARAEI LKVSEDSENP CIVAGYDGMY KYGGKEFKAP ASQSGASLDE CRRITINALK VNDTLCTHMK 501: CTFGGVWNGG RGGGQKNMFV ASFFFDRAAE AGFVDPKQPV ATVRPMDFEK AAKKACSMKL EEGKSTFPLV EEENLPYLCM DLVYQYTLLI DGFGLEPSQT 601: ITLVKKVKYG DQAVEAAWPL GSAIEAVSSP |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)