AT5G15860.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.439 vacuole 0.235 What is SUBAcon? |
|
||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||
| Description (TAIR10) | protein_coding : prenylcysteine methylesterase | ||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with prenylcysteine methylesterase activity. | ||||||||||||
| Computational Description (TAIR10) |
prenylcysteine methylesterase (PCME); CONTAINS InterPro DOMAIN/s: Carboxylesterase type B, active site (InterPro:IPR019826), Carboxylesterase, type B (InterPro:IPR002018); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G02410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
|
||||||||||||
| Coordinates (TAIR10) | chr5:-:5179394..5181263 | ||||||||||||
| Molecular Weight (calculated) | 33405.40 Da | ||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||
| Length | 299 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHSPLQTQQP EQRCWPMTST VSEIEEVLPD EDSDRTTLLN GEPLRRRVSG KSPVDEGPRR IFRQQSFGRD IGHAAAETYL ITGLSFKLLR YLGVGYRWMT 101: KLLALTCYAM LLMPGFLQVA YSYFFSKQVR RSIVYGDQPR NRLDLYLPSN NDGLKPVVVF VTGGAWIIGY KAWGSLLGMQ LAERDIIVAC LDYRNFPQGT 201: ISDMVTDASQ GISFVCNNIS AFGGDPNRIY LMGQSAGAHI AACALLEQAT KELKGESISW TVSQIKAYFG LSGGYLLSFW IPVGFYVLFG LQQLICLSF |
||||||||||||
| See Also |
|
||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)