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AT5G09590.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23444301 (2013): mitochondrion
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22923678 (2012): mitochondrion
  • PMID:22318864 (2012): plasma membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:17137349 (2006): mitochondrion
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mitochondrial HSO70 2
Curator
Summary (TAIR10)
heat shock protein 70 (Hsc70-5); nuclear
Computational
Description (TAIR10)
mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink).
Protein Annotations
BioGrid:16096eggNOG:COG0443eggNOG:KOG0102EMBL:AF217458EMBL:AL353994EMBL:BT046197EMBL:CP002688
EnsemblPlants:AT5G09590EnsemblPlants:AT5G09590.1entrez:830818Gene3D:1.20.1270.10Gene3D:2.60.34.10GeneID:830818Genevisible:Q9LDZ0
GO:GO:0005524GO:GO:0005618GO:GO:0005739GO:GO:0005774GO:GO:0006457GO:GO:0009408GO:GO:0009507
GO:GO:0009615GO:GO:0009651GO:GO:0046686Gramene:AT5G09590.1HAMAP:MF_00332hmmpanther:PTHR19375hmmpanther:PTHR19375:SF179
HOGENOM:HOG000228135InParanoid:Q9LDZ0IntAct:Q9LDZ0InterPro:IPR012725InterPro:IPR013126InterPro:IPR018181InterPro:IPR029047
InterPro:IPR029048iPTMnet:Q9LDZ0KEGG:ath:AT5G09590KO:K03283MINT:MINT-8385682ncoils:CoilOMA:IFASNTK
PaxDb:Q9LDZ0Pfam:PF00012Pfam:Q9LDZ0PhylomeDB:Q9LDZ0PIR:T49939PRIDE:Q9LDZ0PRINTS:PR00301
PRO:PR:Q9LDZ0PROSITE:PS00297PROSITE:PS00329PROSITE:PS01036ProteinModelPortal:Q9LDZ0Proteomes:UP000006548RefSeq:NP_196521.1
scanprosite:PS00297scanprosite:PS00329scanprosite:PS01036SMR:Q9LDZ0STRING:3702.AT5G09590.1SUPFAM:SSF100920SUPFAM:SSF53067
SwissPalm:Q9LDZ0TAIR:AT5G09590tair10-symbols:HSC70-5tair10-symbols:MTHSC70-2TIGRfam:TIGR02350TIGRFAMs:TIGR02350UniGene:At.49002
UniGene:At.72790UniGene:At.73206UniProt:Q9LDZ0
Coordinates (TAIR10) chr5:+:2975721..2978508
Molecular Weight (calculated) 72994.70 Da
IEP (calculated) 5.45
GRAVY (calculated) -0.31
Length 682 amino acids
Sequence (TAIR10)
(BLAST)
001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)