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AT1G79920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Heat shock protein 70 (Hsp 70) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26529 Blast hits to 25703 proteins in 4372 species: Archae - 153; Bacteria - 11749; Metazoa - 3974; Fungi - 1605; Plants - 1160; Viruses - 126; Other Eukaryotes - 7762 (source: NCBI BLink).
Protein Annotations
BioGrid:29550eggNOG:COG0443eggNOG:KOG0103EMBL:AC011717
EMBL:AY065177EMBL:BT000810EMBL:CP002684EnsemblPlants:AT1G79920
EnsemblPlants:AT1G79920.1entrez:844332ExpressionAtlas:F4HQD4Gene3D:1.20.1270.10
Gene3D:2.60.34.10GeneID:844332Genevisible:F4HQD4GO:GO:0005524
GO:GO:0005618GO:GO:0005634GO:GO:0005829GO:GO:0005886
GO:GO:0009506hmmpanther:PTHR19375hmmpanther:PTHR19375:SF190HOGENOM:HOG000228138
InParanoid:F4HQD4InterPro:IPR013126InterPro:IPR029047InterPro:IPR029048
iPTMnet:F4HQD4PaxDb:F4HQD4Pfam:F4HQD4Pfam:PF00012
PhylomeDB:F4HQD4PIR:D96830PRIDE:F4HQD4PRINTS:PR00301
PRO:PR:F4HQD4ProteinModelPortal:F4HQD4Proteomes:UP000006548Reactome:R-ATH-3371453
RefSeq:NP_850984.4SMR:F4HQD4STRING:3702.AT1G79920.1SUPFAM:SSF100920
SUPFAM:SSF100934SUPFAM:SSF53067TAIR:AT1G79920UniGene:At.28629
UniGene:At.74735UniProt:F4HQD4
Coordinates (TAIR10) chr1:-:30058935..30062224
Molecular Weight (calculated) 91685.80 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.42
Length 831 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEIR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLHL IHETTATALA YGIYKTDLPE NDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPM APLNIECLMA EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVVGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAATDA QNGGTENQQS TIVFPKGNPI PSVKALTFYR SGTFSIDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVSVT KDQSEETAKM DTDKASAEAA PASGDSDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAVS NDPKFDHIEL AEKQKVLNEC VEAEAWLREK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP AAKAEAPQAK
801: GGEQADEGKS EPEQPASAEA METENPAEGS T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)