AT1G79920.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Heat shock protein 70 (Hsp 70) family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26529 Blast hits to 25703 proteins in 4372 species: Archae - 153; Bacteria - 11749; Metazoa - 3974; Fungi - 1605; Plants - 1160; Viruses - 126; Other Eukaryotes - 7762 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:30058935..30062224 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 91685.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.83 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 831 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL 101: IHANYLGEIR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLHL IHETTATALA YGIYKTDLPE NDQLNVAFID 201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPM APLNIECLMA EKDVRGVIKR 301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVVGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS 401: LAWKGAATDA QNGGTENQQS TIVFPKGNPI PSVKALTFYR SGTFSIDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL 501: EEEEVEVSVT KDQSEETAKM DTDKASAEAA PASGDSDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE 601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER 701: GSVIDQLGYC INSYREAAVS NDPKFDHIEL AEKQKVLNEC VEAEAWLREK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP AAKAEAPQAK 801: GGEQADEGKS EPEQPASAEA METENPAEGS T |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)