AT4G36980.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17433861..17437012 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 64332.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.93 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.45 | ||||||||||||||||||||||||
| Length | 554 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWHEARRSEK KVHDMMDAAR KRAQRRAIYL AKRRGDPIQS IQAVGSRYRV FRDDGLYQAT EDQQGLIPWN GKQDVMIDRF DGRALLDFVR EAGSRSVRPH 101: KKTEEEEELE EFVNFERYRD LIKHRRRGFS DEEGLQHVHQ ELEAKLAAPF LGTRTQPAQP PANKGTYSQV GFSYAGNGKD NSLDADEDDV DDDEDDEDEE 201: EEFDSNDSDD EGMETIAKQF GIKRYGWLVY MDKKAKEEEK RQKELIKGDP SIKLSRKERR KVSRIERDRE RETSRSVGRQ IIHHDPYRES RRSPTYEAYP 301: RSRRSRSRSR SYSPSYSRRN GRGDHSDEIS KPKIEYITEF GGGSGDMRSP KFEGYSPPRS PPSQSDLLSR PSPGRILEAL HVDPASDISL EKDKVAKPAK 401: STVSTSTALA KLSKVAGTSS SKQSQAEKKE TPQERLKRIM NKQLTKQIKK DSATETAKKR EQERQRLEKL AETSRLSRNR QRSRSRSISR SPPPRRHRRS 501: RSRSGSRSRR SRRHSSRSRS RSPSRSLSRS PKRSRRRSPS YSRSPRRRSS RSRH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)