AT4G34370.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : RING/U-box superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARIADNE 1 (ARI1); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G16090.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16434547..16437037 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66923.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.55 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||
| Length | 581 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDYFSAEEE ACYYSSDQDS LDGIDNEESE LQPLSSKRSN TQVITQESLL AAQREDLLRV MELLSIKEHH ARTLLIHYQW DVEKLFAVFV EKGKDSLFSG 101: AGVTVFDYQY GNSSFPQSSQ MSCDVCMEDL PGWTEHFTVQ INEGQSKRIR CMAHQCNAIC DEDIVRSLVS KKRPDLAAKF DRYLLESYIE DNRMVKWCPS 201: TPHCGNAIRA EDDKLCEVEC SCGLQFCFSC LCQAHSPCSC LMWELWRKKC RDESETINWI TVHTKLCPKC YKPVEKNGGC NLVRCICGQC FCWLCGGATG 301: SDHTYRSIAG HSCGRYQDDK EKQMERAKRD LNRYTHYHHR YKAHTDSSKL EDKLRDTIHE KVSKSEKREL KLKDFSWVTN GLDRLFRSRR VLSYSYAFAY 401: YMFGEEMFKD EMTPEEREIK KNLFEDQQQQ LESNVEKLSQ FLEEPFDEFS NDKVMAIRIQ IINLSVAVDT LCKKMYECIE NDLLGSLQLG IHNISPYRSK 501: GIEQAAQFYA SWNSKDADKF QPLDSGTSGV TSRPEQASGS RSSEDTICSS SQKRPKKEGS FLNNKVTLLD LNLPADFVDQ N |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)