AT4G26570.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : calcineurin B-like 3 | ||||||||||||
| Curator Summary (TAIR10) |
member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) | ||||||||||||
| Computational Description (TAIR10) |
calcineurin B-like 3 (CBL3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 2 (TAIR:AT5G55990.1); Has 7988 Blast hits to 7953 proteins in 833 species: Archae - 0; Bacteria - 10; Metazoa - 3891; Fungi - 1253; Plants - 1902; Viruses - 0; Other Eukaryotes - 932 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13408608..13409998 | ||||||||||||
| Molecular Weight (calculated) | 26539.40 Da | ||||||||||||
| IEP (calculated) | 4.55 | ||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||
| Length | 230 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRY QSQVFDLFDT 101: KHNGILGFEE FARALSVFHP NAPIEDKIDF SFQLYDLKQQ GFIERQEVKQ MVVATLAESG MNLSDEIIES IIDKTFEEAD TKHDGRIDKE EWRTLVLRHP 201: SLLKNMTLQY LKDITTTFPS FVFHSQVEDT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)